Evidence map›Paper›PMID 32996042›Full record

ArticleGenes & genomics2020

Differential expression profile of microRNA in yak skeletal muscle and adipose tissue during development.

Hui Ji, Hui Wang, Qiumei Ji, Winbo Ji, Xiaolin Luo, Jiabo Wang, Zhixin Chai, Jinwei Xin, Xin Cai, Zhijuan Wu and 2 more

Abstract read
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In one paragraph

Article in Genes & genomics, 2020. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 20 papers.

0numbers the graph read from it
0cells of the map it votes in
20citing papers in PubMed
1.0field-weighted citation impact, top 27% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

20 citing papers in PubMed, 30 citations in OpenAlex.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

12 authors at 3 institutions in 1 country.

Hui JiSouthwest Minzu University, No. 16, South Fourth Section, First Ring Road, Chengdu City, 610041, Sichuan Province, China.
Hui WangSouthwest Minzu University, No. 16, South Fourth Section, First Ring Road, Chengdu City, 610041, Sichuan Province, China.
Qiumei JiTibet Academy of Agriculture and Animal Husbandry, No. 130 Jinzhu West Road, Lhasa, 850000, Tibet, China.
Winbo JiSouthwest Minzu University, No. 16, South Fourth Section, First Ring Road, Chengdu City, 610041, Sichuan Province, China.
Xiaolin LuoSichuan Grassland Science Academy, No. 368 Guoning West Road, Pidu District, Chengdu City, 611731, Sichuan Province, China.
Jiabo WangSouthwest Minzu University, No. 16, South Fourth Section, First Ring Road, Chengdu City, 610041, Sichuan Province, China.
Zhixin ChaiSouthwest Minzu University, No. 16, South Fourth Section, First Ring Road, Chengdu City, 610041, Sichuan Province, China.
Jinwei XinTibet Academy of Agriculture and Animal Husbandry, No. 130 Jinzhu West Road, Lhasa, 850000, Tibet, China.
Xin CaiSouthwest Minzu University, No. 16, South Fourth Section, First Ring Road, Chengdu City, 610041, Sichuan Province, China.
Zhijuan WuSouthwest Minzu University, No. 16, South Fourth Section, First Ring Road, Chengdu City, 610041, Sichuan Province, China.
Jikun WangSouthwest Minzu University, No. 16, South Fourth Section, First Ring Road, Chengdu City, 610041, Sichuan Province, China.
Jincheng ZhongSouthwest Minzu University, No. 16, South Fourth Section, First Ring Road, Chengdu City, 610041, Sichuan Province, China. zhongjincheng518@126.com.
Southwest Minzu University · CNTibet Academy of Agricultural and Animal Husbandry Sciences · CNSichuan Animal Science Academy · CN

Funding

Collaborative Innovation Center for Ecological Animal Husbandry of Qinghai-Tibetan Plateau Foundation QZGYXT02National Beef and Yak Industry Technology System Project CARS-37Tibet Autonomous Region Special Financial Project XZNKY-2019-C-052
6 · The paper itself

Abstract

backgroundmiRNAs play an important role in regulating normal animal development. Muscle tissue and fat metabolism are important for maintaining energy balance in animals. Yak has important agricultural and economic importance as it provides milk, meat, and hair. It is used for transportation as well. However, the miRNA expression profiles of their muscle and adipose tissue are currently unknown.

objectiveTo explore the regulatory roles of miRNAs in the skeletal muscle and adipose tissues of yak.

methodsA total of 12 small RNA libraries were constructed from the skeletal muscle and adipose samples from yak aged 0.5, 2.5, 4.5, and 7.5 years. High-throughput sequencing and bioinformatics analysis were used to determine the dynamic expression profile of miRNA, and a miRNA regulatory network related to muscle and adipose tissue development was established.

resultsmiR-1-3p and miR-143-3p showed the highest expression during yak skeletal muscle and fat development, respectively. The MAPK and Ras signaling pathways were the pivotal pathways. miR-181-5p, miR-542-3p, and miR-424-5p may have key roles in skeletal muscle development, and CREBRF, GRB10, CDK1, RFX3, and EPC2 were the core target genes. While miR-127-5p, miR-379-3p, and miR-494-3p may play important regulatory roles in adipose deposition, and ETV1, XPO7, and C5AR2 were the core target genes.

conclusionThis study provides valuable resources for further study of the molecular mechanisms underlying yak skeletal muscle and adipose tissue development, and also a basis for studying the interactions between genes and miRNAs.

Indexed as

Adipose TissueAnimalsCattleGene Expression ProfilingGene Expression Regulation, DevelopmentalHigh-Throughput Nucleotide SequencingLipid MetabolismMeatMicroRNAsMuscle DevelopmentMuscle, SkeletalTranscriptomeMicroRNAsAdiposemiRNASkeletal muscleYak

Identifiers

PMID32996042
OpenAlexW3091292980

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.