Evidence map›Paper›PMID 32995660›Full record

ReviewObesity medicine2020

Single cell sequencing unraveling genetic basis of severe COVID19 in obesity.

Antoine Fakhry AbdelMassih, Raghda Fouda, Aya Kamel, Fady Mishriky, Habiba-Allah Ismail, Layla El Qadi, Lauris Malak, Maram Mohamed, Mariem Arsanyous, Maysa Hazem and 19 more

Open access · greenAbstract readReview
In one paragraph

Review in Obesity medicine, 2020. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 10 papers.

0numbers the graph read from it
0cells of the map it votes in
10citing papers in PubMed
0.3field-weighted citation impact, top 28% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

10 citing papers in PubMed, 12 citations in OpenAlex.

  1. Article
  2. Review
  3. Article
  4. Article
  5. Review
  6. Review
  7. Article
  8. Cell-mediated immunity to SARS-CoV-2.Pediatric investigation · 2020
    Review
  9. Review
  10. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

29 authors at 4 institutions in 4 countries.

Antoine Fakhry AbdelMassihPediatric Cardiology Unit, Pediatrics' Department, Faculty of Medicine, Cairo University, Egypt.
Raghda FoudaClinical and Chemical Pathology Department, Faculty of Medicine, Cairo University, Egypt.
Aya KamelStudent and Internship Research Program (Research Accessibility Team), Faculty of Medicine, Cairo University, Egypt.
Fady MishrikyStudent and Internship Research Program (Research Accessibility Team), Faculty of Medicine, Cairo University, Egypt.
Habiba-Allah IsmailStudent and Internship Research Program (Research Accessibility Team), Faculty of Medicine, Cairo University, Egypt.
Layla El QadiStudent and Internship Research Program (Research Accessibility Team), Faculty of Medicine, Cairo University, Egypt.
Lauris MalakPediatric Cardiology Unit, Pediatrics' Department, Faculty of Medicine, Cairo University, Egypt.
Maram MohamedStudent and Internship Research Program (Research Accessibility Team), Faculty of Medicine, Cairo University, Egypt.
Mariem ArsanyousStudent and Internship Research Program (Research Accessibility Team), Faculty of Medicine, Cairo University, Egypt.
Maysa HazemStudent and Internship Research Program (Research Accessibility Team), Faculty of Medicine, Cairo University, Egypt.
Miral El-HusseinyStudent and Internship Research Program (Research Accessibility Team), Faculty of Medicine, Cairo University, Egypt.
Mirette AshrafStudent and Internship Research Program (Research Accessibility Team), Faculty of Medicine, Cairo University, Egypt.
Nada HafezStudent and Internship Research Program (Research Accessibility Team), Faculty of Medicine, Cairo University, Egypt.
Nada AlShehryStudent and Internship Research Program (Research Accessibility Team), Faculty of Medicine, Cairo University, Egypt.
Nadine El-HusseinyFaculty of Dentistry, Cairo University, Egypt.
Nora AbdelRaoufStudent and Internship Research Program (Research Accessibility Team), Faculty of Medicine, Cairo University, Egypt.
Noura SheblStudent and Internship Research Program (Research Accessibility Team), Faculty of Medicine, Cairo University, Egypt.
Nouran HafezStudent and Internship Research Program (Research Accessibility Team), Faculty of Medicine, Cairo University, Egypt.
Nourhan YoussefStudent and Internship Research Program (Research Accessibility Team), Faculty of Medicine, Cairo University, Egypt.
Peter AfdalStudent and Internship Research Program (Research Accessibility Team), Faculty of Medicine, Cairo University, Egypt.
Rafeef HozaienStudent and Internship Research Program (Research Accessibility Team), Faculty of Medicine, Cairo University, Egypt.
Rahma MenshaweyStudent and Internship Research Program (Research Accessibility Team), Faculty of Medicine, Cairo University, Egypt.
Rana SaeedStudent and Internship Research Program (Research Accessibility Team), Faculty of Medicine, Cairo University, Egypt.
Reem YasserDepartment of Pharmaceutical and Pharmacological Sciences, Faculty of Medicine, Padova University, Padova, Italy.
Shereen HeshamPediatrics' Department, 6th October University, Cairo, Egypt.
Wesam ZakarriahResidency Training Program, Faculty of Medicine, Cairo University, Egypt.
Shahenda KhattabStudent and Internship Research Program (Research Accessibility Team), Faculty of Pharmacy, Cairo University, Egypt.
Yasmine ElammaryClinical and Chemical Pathology Department, Faculty of Medicine, Cairo University, Egypt.
Jianping YeShanghai Diabetes Institute, Shanghai Jiao Tong University Affiliated Sixth People's Hospital, Shanghai, China.
Cairo University · EGOctober 6 University · EGShanghai Jiao Tong University · CNUniversity of Padua · IT

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

COVID-19 has shown a substantial variation in the rate and severity by which it impacts different demographic groups. Specifically, it has shown a predilection towards obese patients as well as well as other vulnerable groups including predilection of males over females, old age over young age and black races over Caucasian ones. Single cell sequencing studies have highlighted the role of cell polarity and the co-expression of proteases, such as Furin, along with ACE2 in the genesis of coronavirus disease rather than exclusively link tissue involvement with ACE2 levels thought previously. It has also forged a connection between the genetic and immune cellular mechanisms underlying COVID infection and the inflammatory state of obese patients, offering a more accurate explanation as to why obese patients are at increased risk of poor COVID outcomes. These commonalities encompass macrophage phenotype switching, genetic expression switching, and overexpression of the pro-inflammatory cytokines, depletion of the regulatory cytokines, in situ T cell proliferation, and T cell exhaustion. These findings demonstrate the necessity of single cell sequencing as a rapid means to identify and treat those who are most likely to need hospital admission and intensive care, in the hopes of precision medicine. Furthermore, this study underlines the use of immune modulators such as Leptin sensitizers, rather than immune suppressors as anti-inflammation therapies to switch the inflammatory response from a drastic immunological type 1 response to a beneficial type 2 effective one.

Indexed as

Beneficial inflammationCOVID-19Deleterious inflammationImmunologic switchObesityShared immunogeneticsSingle cell sequencing

Identifiers

PMID32995660
PMCPMC7513689
OpenAlexW3088853410

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.