Evidence map›Paper›PMID 32995507›Full record

ArticleSynthetic biology (Oxford, England)2017

Design and evaluation of an incoherent feed-forward loop for an arsenic biosensor based on standard iGEM parts.

Federico Barone, Francisco Dorr, Luciano E Marasco, Sebastián Mildiner, Inés L Patop, Santiago Sosa, Lucas G Vattino, Federico A Vignale, Edgar Altszyler, Benjamin Basanta and 7 more

Open access · goldAbstract read
In one paragraph

Article in Synthetic biology (Oxford, England), 2017. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 10 papers.

0numbers the graph read from it
0cells of the map it votes in
10citing papers in PubMed
0.6field-weighted citation impact, top 33% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

10 citing papers in PubMed, 24 citations in OpenAlex.

  1. Article
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  5. Review
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  7. Current landscape and future directions of synthetic biology in South America.Frontiers in bioengineering and biotechnology · 2023
    Review
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

17 authors at 1 institution in 1 country.

Federico BaroneUniversidad de Buenos Aires, Facultad de Ciencias Exactas y Naturales, Departamento de Química Biológica, iGEM 2013 Buenos Aires Team, Buenos Aires, Argentina.
Francisco DorrUniversidad de Buenos Aires, Facultad de Ciencias Exactas y Naturales, Departamento de Química Biológica, iGEM 2013 Buenos Aires Team, Buenos Aires, Argentina.
Luciano E MarascoUniversidad de Buenos Aires, Facultad de Ciencias Exactas y Naturales, Departamento de Química Biológica, iGEM 2013 Buenos Aires Team, Buenos Aires, Argentina.
Sebastián MildinerUniversidad de Buenos Aires, Facultad de Ciencias Exactas y Naturales, Departamento de Química Biológica, iGEM 2013 Buenos Aires Team, Buenos Aires, Argentina.
Inés L PatopUniversidad de Buenos Aires, Facultad de Ciencias Exactas y Naturales, Departamento de Química Biológica, iGEM 2013 Buenos Aires Team, Buenos Aires, Argentina.
Santiago SosaUniversidad de Buenos Aires, Facultad de Ciencias Exactas y Naturales, Departamento de Química Biológica, iGEM 2013 Buenos Aires Team, Buenos Aires, Argentina.
Lucas G VattinoUniversidad de Buenos Aires, Facultad de Ciencias Exactas y Naturales, Departamento de Química Biológica, iGEM 2013 Buenos Aires Team, Buenos Aires, Argentina.
Federico A VignaleUniversidad de Buenos Aires, Facultad de Ciencias Exactas y Naturales, Departamento de Química Biológica, iGEM 2013 Buenos Aires Team, Buenos Aires, Argentina.
Edgar AltszylerUniversidad de Buenos Aires, Facultad de Ciencias Exactas y Naturales, Departamento de Química Biológica, iGEM 2013 Buenos Aires Team, Buenos Aires, Argentina.
Benjamin BasantaUniversidad de Buenos Aires, Facultad de Ciencias Exactas y Naturales, Departamento de Química Biológica, iGEM 2013 Buenos Aires Team, Buenos Aires, Argentina.
Nicolás CarlottoUniversidad de Buenos Aires, Facultad de Ciencias Exactas y Naturales, Departamento de Química Biológica, iGEM 2013 Buenos Aires Team, Buenos Aires, Argentina.
Javier GasullaUniversidad de Buenos Aires, Facultad de Ciencias Exactas y Naturales, Departamento de Química Biológica, iGEM 2013 Buenos Aires Team, Buenos Aires, Argentina.ORCID 0000-0003-0208-399X
Manuel GiménezUniversidad de Buenos Aires, Facultad de Ciencias Exactas y Naturales, Departamento de Química Biológica, iGEM 2013 Buenos Aires Team, Buenos Aires, Argentina.
Alicia GrandeUniversidad de Buenos Aires, Facultad de Ciencias Exactas y Naturales, Departamento de Química Biológica, iGEM 2013 Buenos Aires Team, Buenos Aires, Argentina.
Nicolás Nieto MorenoUniversidad de Buenos Aires, Facultad de Ciencias Exactas y Naturales, Departamento de Química Biológica, iGEM 2013 Buenos Aires Team, Buenos Aires, Argentina.
Hernán R BonomiUniversidad de Buenos Aires, Facultad de Ciencias Exactas y Naturales, Departamento de Química Biológica, iGEM 2013 Buenos Aires Team, Buenos Aires, Argentina.
Alejandro D NadraUniversidad de Buenos Aires, Facultad de Ciencias Exactas y Naturales, Departamento de Química Biológica, iGEM 2013 Buenos Aires Team, Buenos Aires, Argentina.ORCID 0000-0002-7860-3245
Universidad de Buenos Aires · AR

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

The diversity and flexibility of life offers a wide variety of molecules and systems useful for biosensing. A biosensor device should be robust, specific and reliable. Inorganic arsenic is a highly toxic water contaminant with worldwide distribution that poses a threat to public health. With the goal of developing an arsenic biosensor, we designed an incoherent feed-forward loop (I-FFL) genetic circuit to correlate its output pulse with the input signal in a relatively time-independent manner. The system was conceived exclusively based on the available BioBricks in the iGEM Registry of Standard Biological Parts. The expected behavior

Indexed as

arsenicbiosensorI1-FFLiGEMmathematical modeling

Identifiers

PMID32995507
PMCPMC7445792
OpenAlexW2772989436

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.