Evidence map›Paper›PMID 32994509›Full record

ArticleScientific reports2020

Nephronophthisis gene products display RNA-binding properties and are recruited to stress granules.

Luisa Estrada Mallarino, Christina Engel, İbrahim Avşar Ilık, Daniel Maticzka, Florian Heyl, Barbara Müller, Toma A Yakulov, Jörn Dengjel, Rolf Backofen, Asifa Akhtar and 1 more

Open access · goldAbstract read
In one paragraph

Article in Scientific reports, 2020. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 10 papers.

0numbers the graph read from it
0cells of the map it votes in
10citing papers in PubMed
1.8field-weighted citation impact, top 14% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

10 citing papers in PubMed, 17 citations in OpenAlex.

  1. Review
  2. Article
  3. Article
  4. Article
  5. Review
  6. TheBiomedicines · 2024
    Review
  7. Article
  8. Inactivation ofeLife · 2023
    Article
  9. Article
  10. Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

11 authors at 3 institutions in 2 countries.

Luisa Estrada MallarinoRenal Division, Department of Medicine, University Freiburg Medical Center, Faculty of Medicine, University of Freiburg, Hugstetter Str. 55, 79106, Freiburg, Germany.
Christina EngelRenal Division, Department of Medicine, University Freiburg Medical Center, Faculty of Medicine, University of Freiburg, Hugstetter Str. 55, 79106, Freiburg, Germany.
İbrahim Avşar IlıkMax Planck Institute of Immunobiology and Epigenetics, Freiburg, Germany.
Daniel MaticzkaInstitute for Informatics, Albert-Ludwigs-University, Freiburg, Germany.
Florian HeylInstitute for Informatics, Albert-Ludwigs-University, Freiburg, Germany.
Barbara MüllerRenal Division, Department of Medicine, University Freiburg Medical Center, Faculty of Medicine, University of Freiburg, Hugstetter Str. 55, 79106, Freiburg, Germany.
Toma A YakulovRenal Division, Department of Medicine, University Freiburg Medical Center, Faculty of Medicine, University of Freiburg, Hugstetter Str. 55, 79106, Freiburg, Germany.
Jörn DengjelDepartment of Dermatology, Medical Center, and Freiburg Institute for Advanced Studies, University of Freiburg, Freiburg, Germany.
Rolf BackofenInstitute for Informatics, Albert-Ludwigs-University, Freiburg, Germany.
Asifa AkhtarMax Planck Institute of Immunobiology and Epigenetics, Freiburg, Germany.
Gerd WalzRenal Division, Department of Medicine, University Freiburg Medical Center, Faculty of Medicine, University of Freiburg, Hugstetter Str. 55, 79106, Freiburg, Germany. gerd.walz@uniklinik-freiburg.de.
University of Freiburg · DEUniversity Medical Center Freiburg · DEMax Planck Institute for Molecular Genetics · DE

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Mutations of cilia-associated molecules cause multiple developmental defects that are collectively termed ciliopathies. However, several ciliary proteins, involved in gating access to the cilium, also assume localizations at other cellular sites including the nucleus, where they participate in DNA damage responses to maintain tissue integrity. Molecular insight into how these molecules execute such diverse functions remains limited. A mass spectrometry screen for ANKS6-interacting proteins suggested an involvement of ANKS6 in RNA processing and/or binding. Comparing the RNA-binding properties of the known RNA-binding protein BICC1 with the three ankyrin-repeat proteins ANKS3, ANKS6 (NPHP16) and INVERSIN (NPHP2) confirmed that certain nephronophthisis (NPH) family members can interact with RNA molecules. We also observed that BICC1 and INVERSIN associate with stress granules in response to translational inhibition. Furthermore, BICC1 recruits ANKS3 and ANKS6 into TIA-1-positive stress granules after exposure to hippuristanol. Our findings uncover a novel function of NPH family members, and provide further evidence that NPH family members together with BICC1 are involved in stress responses to maintain tissue and organ integrity.

Indexed as

Ankyrin RepeatCarrier ProteinsCiliaCiliopathiesHEK293 CellsHeLa CellsHumansKidneyKidney Diseases, CysticMutationNuclear ProteinsPolycystic Kidney DiseasesRNARNA-Binding ProteinsSterolsStress, PhysiologicalANKS3 protein, humanANKS6 protein, humanBicc1 protein, humanCarrier ProteinshippuristanolINVS protein, humanNuclear ProteinsRNARNA-Binding ProteinsSterolsTranscription Factors

Identifiers

PMID32994509
PMCPMC7524721
OpenAlexW3090563015

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.