Evidence map›Paper›PMID 32994464›Full record

ArticleScientific reports2020

Dental black plaque: metagenomic characterization and comparative analysis with white-plaque.

Verónica Veses, Pedro González-Torres, Belén Carbonetto, Mª Del Mar Jovani-Sancho, Raquel González-Martínez, Isidoro Cortell-Ballester, Chirag C Sheth

Abstract read
In one paragraph

Article in Scientific reports, 2020. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 5 papers, 1 of them a synthesis that pooled it.

0numbers the graph read from it
0cells of the map it votes in
5citing papers in PubMed, 1 pooled it
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

5 citing papers in PubMed, 1 synthesis or guideline pooled it.

  1. Pooled it
  2. Article
  3. Article
  4. Article
  5. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

7 authors.

Verónica VesesDepartment of Biomedical Sciences, Faculty of Health Sciences, Universidad Cardenal Herrera-CEU, CEU Universities, 46113, Moncada, Valencia, Spain.
Pedro González-TorresMicroomics Systems S.L, Barcelona, Spain.
Belén CarbonettoMicroomics Systems S.L, Barcelona, Spain.
Mª Del Mar Jovani-SanchoDepartment of Dentistry, Faculty of Health Sciences, Universidad Cardenal Herrera-CEU, CEU Universities, 46113, Moncada, Valencia, Spain.
Raquel González-MartínezDepartment of Dentistry, Faculty of Health Sciences, Universidad Cardenal Herrera-CEU, CEU Universities, 46113, Moncada, Valencia, Spain.
Isidoro Cortell-BallesterDepartment of Biomedical Sciences, Faculty of Health Sciences, Universidad Cardenal Herrera-CEU, CEU Universities, 46113, Moncada, Valencia, Spain.
Chirag C ShethDepartment of Medicine, Faculty of Health Sciences, Universidad Cardenal Herrera-CEU-, CEU Universities, 46113, Moncada, Valencia, Spain. chirag.sheth@uchceu.es.

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Extrinsic black dental staining is an external dental discoloration of bacterial origin, considered a special form of dental plaque. Currently, there is no definitive therapeutic option for eliminating black stain. This study employed 16S rRNA metagenomics to analyze black stain and white-plaque samples from 27 adult volunteers. Study objectives were to: describe the microbial diversity of adult black stain samples; characterize their taxonomic profile; compare the microbiomes of black stain versus white-plaque from adult volunteers and propose a functional map of the black stain microbiome using PICRUSt2. The black stain microbiome was poorer in species diversity as compared to white-plaque. The five most abundant genera in black stain were Capnocytophaga, Leptotrichia, Fusobacterium, Corynebacterium and Streptococcus. Functional analysis of microbial species revealed conserved and consistent clustering of functional pathways within and between black stain and white-plaque microbiomes. We describe enrichment of heme biosynthetic pathways in black stain. Our results suggest that the dysbiosis in black stain resembles "orally healthy" communities. The increased abundance of heme biosynthetic pathways suggests that heme-dependent iron sequestration and subsequent metabolism are key for black stain formation. Further research should decipher the regulation of heme biosynthetic genes and characterize the temporal sequence leading to colonization and dysbiosis.

Indexed as

AdultCluster AnalysisDental PlaqueDysbiosisFemaleGenes, BacterialHemeHumansMaleMetagenomeMetagenomicsMicrobiotaMiddle AgedPhylogenyRNA, Ribosomal, 16SSalivaHemeRNA, Ribosomal, 16S

Identifiers

PMID32994464
PMCPMC7525459

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.