Evidence map›Paper›PMID 32994326›Full record

ArticlemBio2020

Gene Dispensability in Escherichia coli Grown in Thirty Different Carbon Environments.

Madeline Tong, Shawn French, Sara S El Zahed, Wai Kit Ong, Peter D Karp, Eric D Brown

Erratum issuedOpen access · goldAbstract read
In one paragraph

Article in mBio, 2020. The graph could read no effect estimate from its abstract, so it casts no vote on the map. An erratum has been issued. Cited by 33 papers.

0numbers the graph read from it
0cells of the map it votes in
33citing papers in PubMed
2.1field-weighted citation impact, top 12% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

33 citing papers in PubMed, 45 citations in OpenAlex.

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  14. What makesAntimicrobial agents and chemotherapy · 2024
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4 · The record

Corrections and comments

5 · Who and what money

Authors and funding

6 authors at 2 institutions in 2 countries.

Madeline TongMichael G. DeGroote Institute for Infectious Disease Research, Department of Biochemistry and Biomedical Sciences, McMaster University, Hamilton, Ontario, Canada.
Shawn FrenchMichael G. DeGroote Institute for Infectious Disease Research, Department of Biochemistry and Biomedical Sciences, McMaster University, Hamilton, Ontario, Canada.
Sara S El ZahedMichael G. DeGroote Institute for Infectious Disease Research, Department of Biochemistry and Biomedical Sciences, McMaster University, Hamilton, Ontario, Canada.
Wai Kit OngBioinformatics Research Group, SRI International, Menlo Park, California, USA.
Peter D KarpBioinformatics Research Group, SRI International, Menlo Park, California, USA.
Eric D BrownMichael G. DeGroote Institute for Infectious Disease Research, Department of Biochemistry and Biomedical Sciences, McMaster University, Hamilton, Ontario, Canada ebrown@mcmaster.ca.ORCID 0000-0002-7624-8112
McMaster University · CASRI International · US

Funding

The EcoCyc Model Organism Database for Escherichia coli [SRI Proposal ECU 14-631]U24GM077678 · NIGMS · SRI INTERNATIONAL · PI KARP, PETER D · 2006 to 2018
$12.3M
The EcoCyc Model Organism Database for Escherichia coliR01GM077678 · NIGMS · SRI INTERNATIONAL · PI KARP, PETER D · 2019 to 2022
$4.6M
CIHR FRN 143215NIGMS NIH HHS R01 GM077678NIGMS NIH HHS U24 GM077678
6 · The paper itself

Abstract

Central metabolism is a topic that has been studied for decades, and yet, this process is still not fully understood in

Indexed as

CarbonCulture MediaEscherichia coliEscherichia coli ProteinsGene DeletionGene Expression Regulation, BacterialKineticsMutationPhenotypeCarbonCulture MediaEscherichia coli Proteinscarbon metabolismcarbon sourcecentral metabolismEscherichia coligenetics

Identifiers

PMID32994326
PMCPMC7527729
OpenAlexW3089926889

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.