Evidence map›Paper›PMID 32994285›Full record

ArticlemSystems2020

Size Shapes the Active Microbiome of Methanogenic Granules, Corroborating a Biofilm Life Cycle.

Anna Christine Trego, Sarah O'Sullivan, Christopher Quince, Simon Mills, Umer Zeeshan Ijaz, Gavin Collins

Open access · goldAbstract read
In one paragraph

Article in mSystems, 2020. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 11 papers.

0numbers the graph read from it
0cells of the map it votes in
11citing papers in PubMed
2.6field-weighted citation impact, top 11% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

11 citing papers in PubMed, 23 citations in OpenAlex.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

6 authors at 3 institutions in 2 countries.

Anna Christine TregoMicrobiology, Ryan Institute and School of Natural Sciences, National University of Ireland Galway, Galway, Ireland.
Sarah O'SullivanMicrobiology, Ryan Institute and School of Natural Sciences, National University of Ireland Galway, Galway, Ireland.
Christopher QuinceWarwick Medical School, University of Warwick, Coventry, United Kingdom.
Simon MillsMicrobiology, Ryan Institute and School of Natural Sciences, National University of Ireland Galway, Galway, Ireland.
Umer Zeeshan IjazWater Engineering Group, School of Engineering, University of Glasgow, Glasgow, United Kingdom umer.ijaz@glasgow.ac.uk gavin.collins@nuigalway.ie.
Gavin CollinsMicrobiology, Ryan Institute and School of Natural Sciences, National University of Ireland Galway, Galway, Ireland umer.ijaz@glasgow.ac.uk gavin.collins@nuigalway.ie.ORCID 0000-0002-9947-1130
Ollscoil na Gaillimhe – University of Galway · IEUniversity of Glasgow · GBUniversity of Warwick · GB

Funding

Medical Research Council MR/L015080/1Medical Research Council MR/M50161X/1
6 · The paper itself

Abstract

Methanogenic archaea are key players in cycling organic matter in nature but also in engineered waste treatment systems, where they generate methane, which can be used as a renewable energy source. In such systems in the built environment, complex methanogenic consortia are known to aggregate into highly organized, spherical granular biofilms comprising the interdependent microbial trophic groups mediating the successive stages of the anaerobic digestion (AD) process. This study separated methanogenic granules into a range of discrete size fractions, hypothesizing different biofilm growth stages, and separately supplied each with specific substrates to stimulate the activity of key AD trophic groups, including syntrophic acid oxidizers and methanogens. Rates of specific methanogenic activity were measured, and amplicon sequencing of 16S rRNA gene transcripts was used to resolve phylotranscriptomes across the series of size fractions. Increased rates of methane production were observed in each of the size fractions when hydrogen was supplied as the substrate compared with those of volatile fatty acids (acetate, propionate, and butyrate). This was connected to a shift toward hydrogenotrophic methanogenesis dominated by

Indexed as

anaerobic digestionbiofilmcommunity assemblymethanogenic granulesmicrobial community assembly

Identifiers

PMID32994285
PMCPMC7527134
OpenAlexW3090367046

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.