Evidence map›Paper›PMID 32994184›Full record

ArticleRNA (New York, N.Y.)2020

Human disease-associated single nucleotide polymorphism changes the orientation of DROSHA on pri-mir-146a.

Cong Truc Le, Thuy Linh Nguyen, Trung Duc Nguyen, Tuan Anh Nguyen

Open access · bronzeAbstract read
In one paragraph

Article in RNA (New York, N.Y.), 2020. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 12 papers.

0numbers the graph read from it
0cells of the map it votes in
12citing papers in PubMed
0.9field-weighted citation impact, top 26% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

12 citing papers in PubMed, 14 citations in OpenAlex.

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  10. Consequences of genetic variants in miRNA genes.Computational and structural biotechnology journal · 2022
    Review
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

4 authors at 1 institution in 1 country.

Cong Truc LeDivision of Life Science, The Hong Kong University of Science and Technology, Hong Kong, China.ORCID 0000-0002-8261-2718
Thuy Linh NguyenDivision of Life Science, The Hong Kong University of Science and Technology, Hong Kong, China.ORCID 0000-0001-7943-5012
Trung Duc NguyenDivision of Life Science, The Hong Kong University of Science and Technology, Hong Kong, China.ORCID 0000-0002-5210-7681
Tuan Anh NguyenDivision of Life Science, The Hong Kong University of Science and Technology, Hong Kong, China.ORCID 0000-0001-7793-2699
Hong Kong University of Science and Technology · HK

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

The Microprocessor complex of DROSHA and DGCR8 initiates the biosynthesis of microRNAs (miRNAs) by processing primary miRNAs (pri-miRNAs). The Microprocessor can be oriented on pri-miRNAs in opposite directions to generate productive and unproductive cleavages at their basal and apical junctions, respectively. However, only the productive cleavage gives rise to miRNAs. A single nucleotide polymorphism (SNP, rs2910164) in pri-mir-146a is associated with various human diseases. Although this SNP was found to reduce the expression of miRNA, it is still not known if it affects the activity of the Microprocessor directly, and how it functions. In this study, we revealed that the SNP creates an unexpected mGHG motif at the apical junction of pri-mir-146a. This mGHG motif interacts with the double-stranded RNA-binding domain (dsRBD) of DROSHA, switching its orientation on pri-mir-146a from the basal to the apical junction. As a result, the SNP facilitates Microprocessor to cleave SNP-pri-mir-146a at its unproductive sites. Our findings help to elucidate the molecular mechanism that explains how the disease-associated SNP modulates the biogenesis of pri-mir-146a and thereby affects its cellular functions.

Indexed as

Polymorphism, Single NucleotideRNA Processing, Post-TranscriptionalDiseaseHumansMicroRNAsRibonuclease IIIDROSHA protein, humanMicroRNAsMIRN146 microRNA, humanRibonuclease IIIDGCR8DROSHAmiR-146amiRNArs2910164single nucleotide polymorphism

Identifiers

PMID32994184
PMCPMC7668254
OpenAlexW3091353193

What OpenQuestion holds

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Read underepoch 390

Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.