Evidence map›Paper›PMID 32993136›Full record

ArticleViruses2020

Network Controllability-Based Prioritization of Candidates for SARS-CoV-2 Drug Repositioning.

Emily E Ackerman, Jason E Shoemaker

Open access · goldAbstract read
In one paragraph

Article in Viruses, 2020. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 5 papers.

0numbers the graph read from it
0cells of the map it votes in
5citing papers in PubMed
0.6field-weighted citation impact, top 26% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

5 citing papers in PubMed, 6 citations in OpenAlex.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

2 authors at 1 institution in 1 country.

Emily E AckermanDepartment of Chemical and Petroleum Engineering, University of Pittsburgh, Pittsburgh, PA 15260, USA.
Jason E ShoemakerDepartment of Chemical and Petroleum Engineering, University of Pittsburgh, Pittsburgh, PA 15260, USA.ORCID 0000-0003-3315-7103
University of Pittsburgh · US

Funding

Howard Hughes Medical Institute
6 · The paper itself

Abstract

In a short time, the COVID-19 pandemic has left the world with over 25 million cases and staggering death tolls that are still rising. Treatments for SARS-CoV-2 infection are desperately needed as there are currently no approved drug therapies. With limited knowledge of viral mechanisms, a network controllability method of prioritizing existing drugs for repurposing efforts is optimal for quickly moving through the drug approval pipeline using limited, available, virus-specific data. Based on network topology and controllability, 16 proteins involved in translation, cellular transport, cellular stress, and host immune response are predicted as regulators of the SARS-CoV-2 infected cell. Of the 16, eight are prioritized as possible drug targets where two, PVR and SCARB1, are previously unexplored. Known compounds targeting these genes are suggested for viral inhibition study. Prioritized proteins in agreement with previous analysis and viral inhibition studies verify the ability of network controllability to predict biologically relevant candidates.

Indexed as

BetacoronavirusCoronavirus InfectionsCOVID-19COVID-19 Drug TreatmentDrug ApprovalDrug Delivery SystemsDrug RepositioningHost-Pathogen InteractionsHumansPandemicsPneumonia, ViralProtein Interaction MapsReceptors, VirusSARS-CoV-2Scavenger Receptors, Class BVirus Integrationpoliovirus receptorReceptors, VirusSCARB1 protein, humanScavenger Receptors, Class BCOVID-19drug repositioningnetwork biologySARS-CoV-2virus-host interactions

Identifiers

PMID32993136
PMCPMC7650805
OpenAlexW3087957992

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.