Evidence map›Paper›PMID 32990680›Full record

ArticleJCI insight2020

PDX-derived organoids model in vivo drug response and secrete biomarkers.

Ling Huang, Bruno Bockorny, Indranil Paul, Dipikaa Akshinthala, Pierre-Oliver Frappart, Omar Gandarilla, Arindam Bose, Veronica Sanchez-Gonzalez, Emily E Rouse, Sylvain D Lehoux and 15 more

Registry-linked trialOpen access · goldAbstract read
In one paragraph

Article in JCI insight, 2020. The graph could read no effect estimate from its abstract, so it casts no vote on the map. It is linked to trial NCT04736043 (Development of a Prediction Platform for Adjuvant Treatment and Prognosis in Pancreatic Cancer Using Ex Vivo Analysis of Organoid Culture), which is not on this map. Cited by 76 papers, 1 of them a synthesis that pooled it.

0numbers the graph read from it
0cells of the map it votes in
76citing papers in PubMed, 1 pooled it
5.5field-weighted citation impact, top 3% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

NCT04736043 unknown statusnot on this mapstarted 2021, after this paper: background citation

Development of a Prediction Platform for Adjuvant Treatment and Prognosis in Pancreatic Cancer Using Ex Vivo Analysis of Organoid Culture

TypeobservationalSponsorSamsung Medical CenterRan2021 to 2026Enrolled300ConditionsPancreatic Cancer ResectableArmsOrganoid
3 · Its place in the literature

Who cites it

76 citing papers in PubMed, 1 synthesis or guideline pooled it, 126 citations in OpenAlex.

  1. Pooled it
  2. A Phase III Randomized Trial of Integrated Genomics and Avatar Models for Personalized Treatment of Pancreatic Cancer: The AVATAR Trial.Clinical cancer research : an official journal of the American Association for Cancer Research · 2025
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16 more citing papers are in PubMed but not listed here.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

25 authors at 3 institutions in 2 countries.

Ling HuangCancer Center and.
Bruno BockornyCancer Center and.
Indranil PaulDepartments of Biology and Biochemistry, Boston University, Boston, Massachusetts, USA.
Dipikaa AkshinthalaCancer Center and.
Pierre-Oliver FrappartDepartment of Internal Medicine I, University Hospital Ulm, Ulm, Germany.
Omar GandarillaCancer Center and.
Arindam BoseCancer Center and.
Veronica Sanchez-GonzalezNanoView Biosciences, Boston, Massachusetts, USA.
Emily E RouseDepartment of Surgery and.
Sylvain D LehouxDepartment of Surgery and.
Nicole PandellCancer Center and.
Christine M LimCancer Center and.
John G ClohessyCancer Center and.
Joseph GrossmanCancer Center and.
Raul GonzalezDepartment of Pathology, Beth Israel Deaconess Medical Center, Harvard Medical School, Boston, Massachusetts, USA.
Sofia Perea Del PinoCancer Center and.
George DaaboulNanoView Biosciences, Boston, Massachusetts, USA.
Mandeep S SawhneyCancer Center and.
Steven D FreedmanCancer Center and.
Alexander KlegerDepartment of Internal Medicine I, University Hospital Ulm, Ulm, Germany.
Richard D CummingsDepartment of Surgery and.
Andrew EmiliDepartments of Biology and Biochemistry, Boston University, Boston, Massachusetts, USA.
Lakshmi B MuthuswamyCancer Center and.
Manuel HidalgoCancer Center and.
Senthil K MuthuswamyCancer Center and.
Beth Israel Deaconess Medical Center · USBoston University · USUniversity Hospital Ulm · DE

Funding

Overall Priority Score P41GM103694 · NIGMS · EMORY UNIVERSITY · PI CUMMINGS, RICHARD D · 2013 to 2018
$6.9M
Protein-Glycan Interaction Resource at the National Center for Functional Glycomics (NCFG)R24GM137763 · NIGMS · BETH ISRAEL DEACONESS MEDICAL CENTER · PI RICHARD D CUMMINGS · 2020 to 2026
$5.8M
Stopping PDA progression using inhibitors of CSC dissemination and immunotherapyU01CA224193 · NCI · FRED HUTCHINSON CANCER RESEARCH CENTER · PI HINGORANI, SUNIL R · 2017 to 2021
$3.3M
A Scalable Blood-based Pancreatic Cancer Test for High-Risk ScreeningR43CA213863 · NCI · NANOVIEW DIAGNOSTICS, INC. · PI FREEDMAN, DAVID · 2017 to 2018
$227k
NCI NIH HHS R43 CA213863NCI NIH HHS U01 CA224193NIGMS NIH HHS P41 GM103694NIGMS NIH HHS R24 GM137763
6 · The paper itself

Abstract

Patient-derived organoid models are proving to be a powerful platform for both basic and translational studies. Here we conduct a methodical analysis of pancreatic ductal adenocarcinoma (PDAC) tumor organoid drug response in paired patient-derived xenograft (PDX) and PDX-derived organoid (PXO) models grown under WNT-free culture conditions. We report a specific relationship between area under the curve value of organoid drug dose response and in vivo tumor growth, irrespective of the drug treatment. In addition, we analyzed the glycome of PDX and PXO models and demonstrate that PXOs recapitulate the in vivo glycan landscape. In addition, we identify a core set of 57 N-glycans detected in all 10 models that represent 50%-94% of the relative abundance of all N-glycans detected in each of the models. Last, we developed a secreted biomarker discovery pipeline using media supernatant of organoid cultures and identified potentially new extracellular vesicle (EV) protein markers. We validated our findings using plasma samples from patients with PDAC, benign gastrointestinal diseases, and chronic pancreatitis and discovered that 4 EV proteins are potential circulating biomarkers for PDAC. Thus, we demonstrate the utility of organoid cultures to not only model in vivo drug responses but also serve as a powerful platform for discovering clinically actionable serologic biomarkers.

Indexed as

Disease Models, AnimalAnimalsAntineoplastic AgentsApoptosisBiomarkers, TumorCarcinoma, Pancreatic DuctalCell ProliferationExtracellular VesiclesGene Expression Regulation, NeoplasticHumansMaleMiceMice, NudeOrganoidsPancreatic NeoplasmsPolysaccharidesAntineoplastic AgentsBiomarkers, TumorPolysaccharidesCancerGlycobiologyOncology

Identifiers

PMID32990680
PMCPMC7710298
OpenAlexW3089821962

What OpenQuestion holds

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LicenceCC BY
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Registered trials

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.