Evidence map›Paper›PMID 32990597›Full record

ArticleeLife2020

Histone deacetylase knockouts modify transcription, CAG instability and nuclear pathology in Huntington disease mice.

Marina Kovalenko, Serkan Erdin, Marissa A Andrew, Jason St Claire, Melissa Shaughnessey, Leroy Hubert, João Luís Neto, Alexei Stortchevoi, Daniel M Fass, Ricardo Mouro Pinto and 4 more

Open access · goldAbstract read
In one paragraph

Article in eLife, 2020. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 11 papers.

0numbers the graph read from it
0cells of the map it votes in
11citing papers in PubMed
0.4field-weighted citation impact, top 44% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

11 citing papers in PubMed, 20 citations in OpenAlex.

  1. Review
  2. Huntington's disease LIG1 modifier variant increases ligase fidelity and suppresses somatic CAG repeat expansion.Proceedings of the National Academy of Sciences of the United States of America · 2026
    Article
  3. Review
  4. Article
  5. Article
  6. Article
  7. The roles of epigenetic modifications in neurodegenerative diseases.Zhejiang da xue xue bao. Yi xue ban = Journal of Zhejiang University. Medical sciences · 2021
    Article
  8. Structure-forming repeats and their impact on genome stability.Current opinion in genetics & development · 2021
    Review
  9. Heliyon · 2021
    Review
  10. Review
  11. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

14 authors at 3 institutions in 1 country.

Marina KovalenkoCenter for Genomic Medicine, Harvard Medical School, Boston, United States.
Serkan ErdinCenter for Genomic Medicine, Harvard Medical School, Boston, United States.ORCID 0000-0001-6587-2625
Marissa A AndrewCenter for Genomic Medicine, Harvard Medical School, Boston, United States.
Jason St ClaireCenter for Genomic Medicine, Harvard Medical School, Boston, United States.
Melissa ShaughnesseyCenter for Genomic Medicine, Harvard Medical School, Boston, United States.
Leroy HubertVerna and Marrs McLean Department of Biochemistry and Molecular Biology, Baylor College of Medicine, Houston, United States.
João Luís NetoCenter for Genomic Medicine, Harvard Medical School, Boston, United States.ORCID 0000-0003-0863-158X
Alexei StortchevoiCenter for Genomic Medicine, Harvard Medical School, Boston, United States.
Daniel M FassCenter for Genomic Medicine, Harvard Medical School, Boston, United States.ORCID 0000-0003-0018-8093
Ricardo Mouro PintoCenter for Genomic Medicine, Harvard Medical School, Boston, United States.
Stephen J HaggartyCenter for Genomic Medicine, Harvard Medical School, Boston, United States.ORCID 0000-0002-7872-168X
John H WilsonVerna and Marrs McLean Department of Biochemistry and Molecular Biology, Baylor College of Medicine, Houston, United States.
Michael E TalkowskiCenter for Genomic Medicine, Harvard Medical School, Boston, United States.
Vanessa C WheelerCenter for Genomic Medicine, Harvard Medical School, Boston, United States.ORCID 0000-0003-2619-589X
Harvard University · USBaylor College of Medicine · USBroad Institute · US

Funding

Huntington's Disease Repeat Instability and PathogenesisR01NS049206 · NINDS · MASSACHUSETTS GENERAL HOSPITAL · PI VANESSA C WHEELER · 2005 to 2026
$10.0M
RHODOSPIN GENE CORRECTION BY OLIGONUCLEOTIDE TARGETINGR01EY011731 · NEI · BAYLOR COLLEGE OF MEDICINE · PI WILSON, JOHN H · 1997 to 2014
$5.9M
TARGETED RECOMBINATION IN MAMMALIAN CELLSR01GM038219 · NIGMS · BAYLOR COLLEGE OF MEDICINE · PI WILSON, JOHN H · 1987 to 2013
$4.3M
Instability of Triplet Repeats in Mammalian CellsF31HG004918 · NHGRI · BAYLOR COLLEGE OF MEDICINE · PI HUBERT, LEROY · 2008 to 2009
$82k
NEI NIH HHS R01 EY011731NHGRI NIH HHS F31 HG004918NIGMS NIH HHS R01 GM038219NIH HHS 1 F3 HG004918NIH HHS EY11731NIH HHS GM38219NIH HHS NS049206NINDS NIH HHS R01 NS049206
6 · The paper itself

Abstract

Somatic expansion of the Huntington's disease (HD) CAG repeat drives the rate of a pathogenic process ultimately resulting in neuronal cell death. Although mechanisms of toxicity are poorly delineated, transcriptional dysregulation is a likely contributor. To identify modifiers that act at the level of CAG expansion and/or downstream pathogenic processes, we tested the impact of genetic knockout, in

Indexed as

AnimalsCell NucleusCorpus StriatumDisease Models, AnimalHistone Deacetylase 2Histone Deacetylase 3Histone DeacetylasesHuntingtin ProteinHuntington DiseaseMiceMice, Inbred C57BLNeuronsHdac2 protein, mouseHistone Deacetylase 2Histone Deacetylase 3Histone DeacetylasesHtt protein, mouseHuntingtin Proteinchromatingeneticsgenomicshistone deacatylasehuntington's diseasemedium spiny neuronmouseneurosciencerepeat instability

Identifiers

PMID32990597
PMCPMC7581428
OpenAlexW3089506874

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.