Evidence map›Paper›PMID 32990380›Full record

ArticleCell proliferation2020

KLF3 promotes the 8-cell-like transcriptional state in pluripotent stem cells.

Jing Hao, Xi Yang, Chao Zhang, Xue-Tao Zhang, Ming Shi, Shao-Hua Wang, Li Mi, Yu-Ting Zhao, Huiqing Cao, Yangming Wang

Open access · goldAbstract read
In one paragraph

Article in Cell proliferation, 2020. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 5 papers.

0numbers the graph read from it
0cells of the map it votes in
5citing papers in PubMed
0.3field-weighted citation impact, top 42% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

5 citing papers in PubMed, 11 citations in OpenAlex.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

10 authors at 1 institution in 1 country.

Jing HaoBeijing Key Laboratory of Cardiometabolic Molecular Medicine, Institute of Molecular Medicine, Peking University, Beijing, China.
Xi YangBeijing Key Laboratory of Cardiometabolic Molecular Medicine, Institute of Molecular Medicine, Peking University, Beijing, China.
Chao ZhangAcademy for Advanced Interdisciplinary Studies, Peking University, Beijing, China.
Xue-Tao ZhangAcademy for Advanced Interdisciplinary Studies, Peking University, Beijing, China.
Ming ShiBeijing Key Laboratory of Cardiometabolic Molecular Medicine, Institute of Molecular Medicine, Peking University, Beijing, China.
Shao-Hua WangBeijing Key Laboratory of Cardiometabolic Molecular Medicine, Institute of Molecular Medicine, Peking University, Beijing, China.
Li MiBeijing Key Laboratory of Cardiometabolic Molecular Medicine, Institute of Molecular Medicine, Peking University, Beijing, China.
Yu-Ting ZhaoAcademy for Advanced Interdisciplinary Studies, Peking University, Beijing, China.
Huiqing CaoBeijing Key Laboratory of Cardiometabolic Molecular Medicine, Institute of Molecular Medicine, Peking University, Beijing, China.
Yangming WangBeijing Key Laboratory of Cardiometabolic Molecular Medicine, Institute of Molecular Medicine, Peking University, Beijing, China.ORCID https://orcid.org/0000-0001-6974-6060
Peking University · CN

Funding

National Natural Science Foundation of China 31821091National Natural Science Foundation of China 91940302The National Key Research and Development Program of Ministry of Science and Technology of the People's Republic of China 2016YFA0100701The National Key Research and Development Program of Ministry of Science and Technology of the People's Republic of China 2018YFA0107601
6 · The paper itself

Abstract

objectivesMouse embryonic stem cell (mESC) culture contains various heterogeneous populations, which serve as excellent models to study gene regulation in early embryo development. The heterogeneity is typically defined by transcriptional activities, for example, the expression of Nanog or Rex1 mRNA. Our objectives were to identify mESC heterogeneity that are caused by mechanisms other than transcriptional control. MATERIALS AND

methodsKlf3 mRNA and protein were analysed by RT-qPCR, Western blotting or immunofluorescence in mESCs, C2C12 cells, early mouse embryos and various mouse tissues. An ESC reporter line expressing KLF3-GFP fusion protein was made to study heterogeneity of KLF3 protein expression in ESCs. GFP-positive mESCs were sorted for further analysis including RT-qPCR and RNA-seq.

resultsIn the majority of mESCs, KLF3 protein is actively degraded due to its proline-rich sequence and highly disordered structure. Interestingly, KLF3 protein is stabilized in a small subset of mESCs. Transcriptome analysis indicates that KLF3-positive mESCs upregulate genes that are initially activated in 8-cell embryos. Consistently, KLF3 protein but not mRNA is dramatically increased in 8-cell embryos. Forced expression of KLF3 protein in mESCs promotes the expression of 8-cell-embryo activated genes.

conclusionsOur study identifies previously unrecognized heterogeneity due to KLF3 protein expression in mESCs.

Indexed as

Gene Expression Regulation, DevelopmentalAnimalsCell DifferentiationCell LineEmbryo, MammalianKruppel-Like Transcription FactorsMiceMouse Embryonic Stem CellsMyoblastsRNA, MessengerTranscriptional ActivationTranscriptomeKlf3 protein, mouseKruppel-Like Transcription FactorsRNA, Messengerearly embryo developmentembryonic stem cellsheterogeneityKlf3protein degradation

Identifiers

PMID32990380
PMCPMC7653263
OpenAlexW3090577312

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.