Evidence map›Paper›PMID 32989325›Full record

ArticleNature genetics2020

The mosaic genome of indigenous African cattle as a unique genetic resource for African pastoralism.

Kwondo Kim, Taehyung Kwon, Tadelle Dessie, DongAhn Yoo, Okeyo Ally Mwai, Jisung Jang, Samsun Sung, SaetByeol Lee, Bashir Salim, Jaehoon Jung and 12 more

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In one paragraph

Article in Nature genetics, 2020. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 81 papers.

0numbers the graph read from it
0cells of the map it votes in
81citing papers in PubMed
12.2field-weighted citation impact, top 1% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

81 citing papers in PubMed, 148 citations in OpenAlex.

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  15. The chromosome-level genome of Chinese indicine cattle breed provides insights into bovine adaptation and immunity.DNA research : an international journal for rapid publication of reports on genes and genomes · 2026
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21 more citing papers are in PubMed but not listed here.

4 · The record

Corrections and comments

5 · Who and what money

Authors and funding

22 authors at 9 institutions in 7 countries.

Kwondo KimDepartment of Agricultural Biotechnology and Research Institute of Agriculture and Life Sciences, Seoul National University, Seoul, Republic of Korea.ORCID http://orcid.org/0000-0001-8254-528X
Taehyung KwonDepartment of Agricultural Biotechnology and Research Institute of Agriculture and Life Sciences, Seoul National University, Seoul, Republic of Korea.ORCID http://orcid.org/0000-0002-5668-059X
Tadelle DessieInternational Livestock Research Institute (ILRI), Addis Ababa, Ethiopia.
DongAhn YooInterdisciplinary Program in Bioinformatics, Seoul National University, Seoul, Republic of Korea.
Okeyo Ally MwaiInternational Livestock Research Institute (ILRI), Nairobi, Kenya.
Jisung JangInterdisciplinary Program in Bioinformatics, Seoul National University, Seoul, Republic of Korea.
Samsun SungC&K Genomics, Seoul, Republic of Korea.
SaetByeol LeeC&K Genomics, Seoul, Republic of Korea.
Bashir SalimDepartment of Parasitology, Faculty of Veterinary Medicine, University of Khartoum, Khartoum North, Sudan.ORCID http://orcid.org/0000-0002-3665-2217
Jaehoon JungDepartment of Agricultural Biotechnology and Research Institute of Agriculture and Life Sciences, Seoul National University, Seoul, Republic of Korea.
Heesu JeongInterdisciplinary Program in Bioinformatics, Seoul National University, Seoul, Republic of Korea.
Getinet Mekuriaw TarekegnDepartment of Animal Breeding and Genetics, Swedish University of Agricultural Sciences, Uppsala, Sweden.
Abdulfatai TijjaniInternational Livestock Research Institute (ILRI), Addis Ababa, Ethiopia.ORCID http://orcid.org/0000-0002-0793-9059
Dajeong LimAnimal Genomics & Bioinformatics Division, National Institute of Animal Science, RDA, Wanju, Republic of Korea.
Seoae ChoC&K Genomics, Seoul, Republic of Korea.
Sung Jong OhInternational Agricultural Development and Cooperation Center, Jeonbuk National University, Jeonju, Republic of Korea.
Hak-Kyo LeeDepartment of Animal Biotechnology, College of Agriculture and Life Sciences, Jeonbuk National University, Jeonju, Republic of Korea.
Jaemin KimDepartment of Animal Science, College of Agriculture and Life Sciences, Gyeongsang National University, Jinju, Republic of Korea.
Choongwon JeongSchool of Biological Sciences, Seoul National University, Seoul, Republic of Korea.ORCID http://orcid.org/0000-0003-3049-2352
Stephen KempInternational Livestock Research Institute (ILRI), Nairobi, Kenya.
Olivier HanotteInternational Livestock Research Institute (ILRI), Addis Ababa, Ethiopia. o.hanotte@cgiar.org.ORCID http://orcid.org/0000-0002-2877-4767
Heebal KimDepartment of Agricultural Biotechnology and Research Institute of Agriculture and Life Sciences, Seoul National University, Seoul, Republic of Korea. heebal@snu.ac.kr.ORCID http://orcid.org/0000-0003-3064-1303
Seoul National University · KRCrystalGenomics (South Korea) · KRRoslin Institute · GBJeonbuk National University · KRGyeongsang National University · KRInternational Livestock Research Institute · KENational Institute of Animal Science · KRSwedish University of Agricultural Sciences · SEUniversity of Khartoum · SD

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Cattle pastoralism plays a central role in human livelihood in Africa. However, the genetic history of its success remains unknown. Here, through whole-genome sequence analysis of 172 indigenous African cattle from 16 breeds representative of the main cattle groups, we identify a major taurine × indicine cattle admixture event dated to circa 750-1,050 yr ago, which has shaped the genome of today's cattle in the Horn of Africa. We identify 16 loci linked to African environmental adaptations across crossbred animals showing an excess of taurine or indicine ancestry. These include immune-, heat-tolerance- and reproduction-related genes. Moreover, we identify one highly divergent locus in African taurine cattle, which is putatively linked to trypanotolerance and present in crossbred cattle living in trypanosomosis-infested areas. Our findings indicate that a combination of past taurine and recent indicine admixture-derived genetic resources is at the root of the present success of African pastoralism.

Indexed as

BreedingCattleGenomeWhole Genome SequencingAdaptation, PhysiologicalAfricaAllelesAnimalsGenotypeHot TemperatureMosaicismPolymorphism, Single NucleotideReproduction

Identifiers

PMID32989325
OpenAlexW3091710808

What OpenQuestion holds

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Read underepoch 390

Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.