Evidence map›Paper›PMID 32989140›Full record

ArticleProceedings of the National Academy of Sciences of the United States of America2020

ssRNA phage penetration triggers detachment of the F-pilus.

Laith Harb, Karthik Chamakura, Pratick Khara, Peter J Christie, Ry Young, Lanying Zeng

Open access · bronzeAbstract read
In one paragraph

Article in Proceedings of the National Academy of Sciences of the United States of America, 2020. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 32 papers.

0numbers the graph read from it
0cells of the map it votes in
32citing papers in PubMed
2.1field-weighted citation impact, top 12% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

32 citing papers in PubMed, 42 citations in OpenAlex.

  1. Article
  2. Article
  3. Article
  4. Article
  5. Review
  6. Article
  7. Suppressing Transfer of Antibiotic Resistance by a Small RNA Virus.bioRxiv : the preprint server for biology · 2026
    Article
  8. Article
  9. Article
  10. Engineered Proteins Mimic ssRNA Phage to Disrupt Type IV Pili.bioRxiv : the preprint server for biology · 2025
    Article
  11. Extracellular uncoating of bacteriophage MS2.Journal of molecular biology · 2025
    Article
  12. Article
  13. Article
  14. Review
  15. Review
  16. Removal ofScience (New York, N.Y.) · 2024
    Article
  17. Article
  18. Article
  19. Article
  20. Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

6 authors at 2 institutions in 1 country.

Laith HarbDepartment of Biochemistry and Biophysics, Texas A&M University, College Station, TX 77843.ORCID 0000-0001-8914-5764
Karthik ChamakuraDepartment of Biochemistry and Biophysics, Texas A&M University, College Station, TX 77843.ORCID 0000-0002-6196-8571
Pratick KharaDepartment of Microbiology and Molecular Genetics, The University of Texas Health Science Center at Houston, Houston, TX 77030.
Peter J ChristieDepartment of Microbiology and Molecular Genetics, The University of Texas Health Science Center at Houston, Houston, TX 77030.
Ry YoungDepartment of Biochemistry and Biophysics, Texas A&M University, College Station, TX 77843.ORCID 0000-0001-8001-2914
Lanying ZengDepartment of Biochemistry and Biophysics, Texas A&M University, College Station, TX 77843; lzeng@tamu.edu.ORCID 0000-0002-8074-5824
Texas A&M University · USThe University of Texas Health Science Center at Houston · US

Funding

CONTROL OF VIRUS-INDUCED LYSISR01GM027099 · NIGMS · TEXAS A&M UNIVERSITY HEALTH SCIENCE CTR · PI YOUNG, RYLAND FLETCHER · 1985 to 2019
$4.6M
Biological And Structural Diversity Of Bacterial Type IV Secretion SystemsR35GM131892 · NIGMS · UNIVERSITY OF TEXAS HLTH SCI CTR HOUSTON · PI PETER j. CHRISTIE · 2019 to 2026
$3.8M
Phage LysisR35GM136396 · NIGMS · TEXAS A&M AGRILIFE RESEARCH · PI YOUNG, RYLAND FLETCHER · 2020 to 2024
$1.9M
NIGMS NIH HHS R01 GM027099NIGMS NIH HHS R35 GM131892NIGMS NIH HHS R35 GM136396
6 · The paper itself

Abstract

Although the F-specific ssRNA phage MS2 has long had paradigm status, little is known about penetration of the genomic RNA (gRNA) into the cell. The phage initially binds to the F-pilus using its maturation protein (Mat), and then the Mat-bound gRNA is released from the viral capsid and somehow crosses the bacterial envelope into the cytoplasm. To address the mechanics of this process, we fluorescently labeled the ssRNA phage MS2 to track F-pilus dynamics during infection. We discovered that ssRNA phage infection triggers the release of F-pili from host cells, and that higher multiplicity of infection (MOI) correlates with detachment of longer F-pili. We also report that entry of gRNA into the host cytoplasm requires the F-plasmid-encoded coupling protein, TraD, which is located at the cytoplasmic entrance of the F-encoded type IV secretion system (T4SS). However, TraD is not essential for pilus detachment, indicating that detachment is triggered by an early step of MS2 engagement with the F-pilus or T4SS. We propose a multistep model in which the ssRNA phage binds to the F-pilus and through pilus retraction engages with the distal end of the T4SS channel at the cell surface. Continued pilus retraction pulls the Mat-gRNA complex out of the virion into the T4SS channel, causing a torsional stress that breaks the mature F-pilus at the cell surface. We propose that phage-induced disruptions of F-pilus dynamics provides a selective advantage for infecting phages and thus may be prevalent among the phages specific for retractile pili.

Indexed as

Escherichia coliEscherichia coli ProteinsFimbriae, BacterialLevivirusRNA, ViralRNA VirusesType IV Secretion SystemsEscherichia coli ProteinsRNA, ViralType IV Secretion SystemsF-pilusgenomic RNA entrypili detachmentpili retractionssRNA phage MS2

Identifiers

PMID32989140
PMCPMC7568308
OpenAlexW3089571607

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.