Evidence map›Paper›PMID 32987857›Full record

ArticleCells2020

Integrative Multi-Omics Analysis in Calcific Aortic Valve Disease Reveals a Link to the Formation of Amyloid-Like Deposits.

Marina A Heuschkel, Nikolaos T Skenteris, Joshua D Hutcheson, Dewy D van der Valk, Juliane Bremer, Philip Goody, Jesper Hjortnaes, Felix Jansen, Carlijn V C Bouten, Antoon van den Bogaerdt and 3 more

Open access · goldAbstract read
In one paragraph

Article in Cells, 2020. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 25 papers, 1 of them a synthesis that pooled it.

0numbers the graph read from it
0cells of the map it votes in
25citing papers in PubMed, 1 pooled it
2.4field-weighted citation impact, top 9% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

25 citing papers in PubMed, 1 synthesis or guideline pooled it, 31 citations in OpenAlex.

  1. Pooled it
  2. Review
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  5. Article
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  7. Article
  8. Iranian journal of public health · 2024
    Article
  9. Article
  10. Article
  11. Review
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  16. Network-Guided Multiomic Mapping of Aortic Valve Calcification.Arteriosclerosis, thrombosis, and vascular biology · 2023
    Review
  17. Article
  18. Article
  19. Article
  20. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

13 authors at 6 institutions in 4 countries.

Marina A HeuschkelDepartment of Internal Medicine I-Cardiology, Medical Faculty, RWTH Aachen University, 52074 Aachen, Germany.
Nikolaos T SkenterisCardiovascular Medicine Unit, Department of Medicine, Karolinska Institute, 17177 Stockholm, Sweden.
Joshua D HutchesonDepartment of Biomedical Engineering, Florida International University, Miami, FL 33174, USA.
Dewy D van der ValkDepartment of Biomedical Engineering, Eindhoven University of Technology, 5600 Eindhoven, The Netherlands.ORCID 0000-0001-6217-6413
Juliane BremerDepartment of Neuropathology, University Hospital, RWTH Aachen University, 52074 Aachen, Germany.ORCID 0000-0002-0268-9425
Philip GoodyHeart Center Bonn, Department of Medicine II, University Hospital Bonn, 53012 Bonn, Germany.ORCID 0000-0002-1485-4221
Jesper HjortnaesDepartment of Cardiothoracic Surgery Division Heart and Lung, University Medical Center Utrecht, 3584 Utrecht, The Netherlands.
Felix JansenHeart Center Bonn, Department of Medicine II, University Hospital Bonn, 53012 Bonn, Germany.
Carlijn V C BoutenDepartment of Biomedical Engineering, Eindhoven University of Technology, 5600 Eindhoven, The Netherlands.ORCID 0000-0003-1035-5094
Antoon van den BogaerdtHeart Valve Department, ETB-BISLIFE, 1940 Beverwijk, The Netherlands.
Ljubica MaticDepartment of Molecular Medicine and Surgery, Karolinska Institute, 17177 Stockholm, Sweden.
Nikolaus MarxDepartment of Internal Medicine I-Cardiology, Medical Faculty, RWTH Aachen University, 52074 Aachen, Germany.
Claudia GoettschDepartment of Internal Medicine I-Cardiology, Medical Faculty, RWTH Aachen University, 52074 Aachen, Germany.ORCID 0000-0002-7973-1329
RWTH Aachen University · DEEindhoven University of Technology · NLKarolinska Institutet · SEUniversity Hospital Bonn · DEFlorida International University · USUtrecht University · NL

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Calcific aortic valve disease (CAVD) is the most prevalent valvular heart disease in the developed world, yet no pharmacological therapy exists. Here, we hypothesize that the integration of multiple omic data represents an approach towards unveiling novel molecular networks in CAVD. Databases were searched for CAVD omic studies. Differentially expressed molecules from calcified and control samples were retrieved, identifying 32 micro RNAs (miRNA), 596 mRNAs and 80 proteins. Over-representation pathway analysis revealed platelet degranulation and complement/coagulation cascade as dysregulated pathways. Multi-omics integration of overlapping proteome/transcriptome molecules, with the miRNAs, identified a CAVD protein-protein interaction network containing seven seed genes (apolipoprotein A1 (APOA1), hemoglobin subunit β (HBB), transferrin (TF), α-2-macroglobulin (A2M), transforming growth factor β-induced protein (TGFBI), serpin family A member 1 (SERPINA1), lipopolysaccharide binding protein (LBP), inter-α-trypsin inhibitor heavy chain 3 (ITIH3) and immunoglobulin κ constant (IGKC)), four input miRNAs (miR-335-5p, miR-3663-3p, miR-21-5p, miR-93-5p) and two connector genes (amyloid beta precursor protein (APP) and transthyretin (TTR)). In a metabolite-gene-disease network, Alzheimer's disease exhibited the highest degree of betweenness. To further strengthen the associations based on the multi-omics approach, we validated the presence of APP and TTR in calcified valves from CAVD patients by immunohistochemistry. Our study suggests a novel molecular CAVD network potentially linked to the formation of amyloid-like structures. Further investigations on the associated mechanisms and therapeutic potential of targeting amyloid-like deposits in CAVD may offer significant health benefits.

Indexed as

GenomicsAgedAmyloidAortic ValveAortic Valve StenosisBenzothiazolesCalcinosisFemaleGene Regulatory NetworksHumansMaleMetabolomeMiddle AgedPrealbuminSignal TransductionAmyloidBenzothiazolesPrealbuminthioflavin Tamyloid structurescalcific aortic valve diseasemulti-omics integrationproteomicstranscriptomics

Identifiers

PMID32987857
PMCPMC7600313
OpenAlexW3087804710

What OpenQuestion holds

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LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.