Evidence map›Paper›PMID 32986792›Full record

ArticleClinical infectious diseases : an official publication of the Infectious Diseases Society of America2021

Cerebrospinal Fluid Bacillary Load by Xpert MTB/RIF Ultra Polymerase Chain Reaction Cycle Threshold Value Predicts 2-Week Mortality in Human Immunodeficiency Virus-Associated Tuberculous Meningitis.

Emily M Martyn, Ananta S Bangdiwala, Enock Kagimu, Morris K Rutakingirwa, John Kasibante, Michael Okirwoth, Gavin Stead, Vincent Wadda, Matthew F Pullen, Tyler D Bold and 4 more

Open access · hybridAbstract read
In one paragraph

Article in Clinical infectious diseases : an official publication of the Infectious Diseases Society of America, 2021. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 6 papers.

0numbers the graph read from it
0cells of the map it votes in
6citing papers in PubMed
1.8field-weighted citation impact, top 14% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

6 citing papers in PubMed, 14 citations in OpenAlex.

  1. Article
  2. Article
  3. More thanThorax · 2023
    Article
  4. Article
  5. Fujifilm SILVAMP TB LAM Assay on Cerebrospinal Fluid for the Detection of Tuberculous Meningitis in Adults With Human Immunodeficiency Virus.Clinical infectious diseases : an official publication of the Infectious Diseases Society of America · 2021
    Article
  6. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

14 authors at 5 institutions in 3 countries.

Emily M MartynInfectious Diseases Institute, Kampala, Uganda.ORCID 0000-0003-4981-9298
Ananta S BangdiwalaUniversity of Minnesota, Minneapolis, Minneapolis, USA.
Enock KagimuInfectious Diseases Institute, Kampala, Uganda.
Morris K RutakingirwaInfectious Diseases Institute, Kampala, Uganda.
John KasibanteInfectious Diseases Institute, Kampala, Uganda.
Michael OkirwothInfectious Diseases Institute, Kampala, Uganda.
Gavin SteadInfectious Diseases Institute, Kampala, Uganda.
Vincent WaddaMulago National Referral Hospital, Kampala, Uganda.
Matthew F PullenUniversity of Minnesota, Minneapolis, Minneapolis, USA.
Tyler D BoldUniversity of Minnesota, Minneapolis, Minneapolis, USA.
David B MeyaInfectious Diseases Institute, Kampala, Uganda.
David R BoulwareUniversity of Minnesota, Minneapolis, Minneapolis, USA.
Nathan C BahrUniversity of Kansas Medical Center, Kansas City, Kansas, USA.
Fiona V CresswellInfectious Diseases Institute, Kampala, Uganda.
Infectious Diseases Institute · UGUniversity of Minnesota · USLondon School of Hygiene & Tropical Medicine · GBMulago Hospital · UGUniversity of Kansas Medical Center · US

Funding

Improving Diagnostics and Neurocognitive Outcomes in HIV/AIDS-related MeningitisR01NS086312 · NINDS · UNIVERSITY OF MINNESOTA · PI David R Boulware, David Bisagaya Meya · 2013 to 2026
$8.3M
Infectious Disease Training in Clinical InvestigationT32AI055433 · NIAID · UNIVERSITY OF MINNESOTA TWIN CITIES · PI David R Boulware · 2003 to 2026
$6.1M
Redefining Tuberculosis Meningitis with Metagenomics and Host TransciptomicsR01AI145437 · NIAID · UNIVERSITY OF CALIFORNIA, SAN FRANCISCO · PI WILSON, MICHAEL R · 2019 to 2023
$3.5M
Novel Diagnostic Development for TB Meningitis and HistoplasmosisK23NS110470 · NINDS · UNIVERSITY OF MINNESOTA · PI BAHR, NATHAN · 2019 to 2023
$1.0M
FIC NIH HHSNIAID NIH HHS R01 AI145437NIAID NIH HHS T32 AI055433NINDS NIH HHS K23 NS110470NINDS NIH HHS R01 NS086312Wellcome TrustWellcome Trust 210772/Z/18/Z
6 · The paper itself

Abstract

backgroundThe World Health Organization recommends GeneXpert MTB/RIF Ultra (Xpert Ultra), a fully automated polymerase chain reaction (PCR) assay, as the initial tuberculous meningitis (TBM) diagnostic test. The assay's PCR cycle threshold (Ct) values represent the number of PCR cycles required for probe signal to be detected (low Ct value = high bacillary load) and may approximate tuberculosis (TB) bacillary load. We measured the relationship between cerebrospinal fluid (CSF) TB bacillary load with mortality.

methodsWe prospectively enrolled 102 human immunodeficiency virus (HIV)-positive Ugandans with probable or definite TBM from April 2015 to August 2019. Xpert Ultra Ct tertiles and semi-quantitative categories were separately analyzed as predictors of 2-week mortality. We investigated associations between Ct and baseline clinical and CSF parameters.

resultsSubjects with Ct values in the low tertile (ie, high bacillary load) had 57% 2-week mortality-worse than the intermediate (17%) and high (25%) Ct tertiles and Xpert Ultra-negative (30%) probable TBM cases (P = .01). In contrast, the reported semi-quantitative Xpert Ultra categorization was less precise; with the medium to low category trending toward worse 2-week survival (42%) compared with very low (28%), trace (26%), and negative (30%) categories (P = .48). Ct tertile was significantly associated with baseline CSF lactate (P = .03).

conclusionsHigh CSF TB bacillary load, as measured by Xpert Ultra Ct tertile, is associated with an almost 2-fold higher 2-week mortality in HIV-associated TBM and is a better predictor than the reported Xpert Ultra semi-quantitative category. Xpert Ultra Ct values could identify TBM patients at increased risk of death who may benefit from enhanced supportive care.

Indexed as

HIV InfectionsMycobacterium tuberculosisTuberculosis, MeningealDiagnostic Tests, RoutineHIVHumansMolecular Diagnostic TechniquesPolymerase Chain ReactionSensitivity and SpecificityGeneXpert UltraTB meningitistuberculous meningitisultra

Identifiers

PMID32986792
PMCPMC8563165
OpenAlexW3090707617

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.