Evidence map›Paper›PMID 32985870›Full record

ArticleAnalytical chemistry2020

Glycoproteomic Analysis of Human Urinary Exosomes.

Christopher J Brown, Stefan Gaunitz, Ziyu Wang, Lena Strindelius, Stephen C Jacobson, David E Clemmer, Jonathan C Trinidad, Milos V Novotny

Open access · greenAbstract read
In one paragraph

Article in Analytical chemistry, 2020. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 9 papers.

0numbers the graph read from it
0cells of the map it votes in
9citing papers in PubMed
1.0field-weighted citation impact, top 25% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

9 citing papers in PubMed, 19 citations in OpenAlex.

  1. Review
  2. Review
  3. Uromodulin and the study of urinary extracellular vesicles.Journal of extracellular biology · 2024
    Review
  4. Review
  5. Article
  6. Review
  7. Review
  8. Towards structure-focused glycoproteomics.Biochemical Society transactions · 2021
    Review
  9. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

8 authors at 1 institution in 1 country.

Christopher J BrownDepartment of Chemistry, Indiana University, 800 Kirkwood Avenue, Bloomington, Indiana 47401, United States.
Stefan GaunitzDepartment of Chemistry, Indiana University, 800 Kirkwood Avenue, Bloomington, Indiana 47401, United States.
Ziyu WangDepartment of Chemistry, Indiana University, 800 Kirkwood Avenue, Bloomington, Indiana 47401, United States.
Lena StrindeliusDepartment of Chemistry, Indiana University, 800 Kirkwood Avenue, Bloomington, Indiana 47401, United States.
Stephen C JacobsonDepartment of Chemistry, Indiana University, 800 Kirkwood Avenue, Bloomington, Indiana 47401, United States.ORCID 0000-0003-2415-041X
David E ClemmerDepartment of Chemistry, Indiana University, 800 Kirkwood Avenue, Bloomington, Indiana 47401, United States.ORCID 0000-0003-4039-1360
Jonathan C TrinidadDepartment of Chemistry, Indiana University, 800 Kirkwood Avenue, Bloomington, Indiana 47401, United States.ORCID 0000-0002-8279-1509
Milos V NovotnyDepartment of Chemistry, Indiana University, 800 Kirkwood Avenue, Bloomington, Indiana 47401, United States.ORCID 0000-0001-5530-7059
Indiana University Bloomington · US

Funding

Microfluidic Devices for Cancer Screening by N-Glycan AnalysisR01GM106084 · NIGMS · TRUSTEES OF INDIANA UNIVERSITY · PI JACOBSON, STEPHEN C · 2014 to 2017
$1.2M
New proteome techniques: mapping adult D. MelanogasterR01GM117207 · NIGMS · TRUSTEES OF INDIANA UNIVERSITY · PI CLEMMER, DAVID E. · 2015 to 2018
$1.1M
ATP1A3 Induced Alterations to Glutamate Signaling Protein Networks in SchizophreniaK01MH107756 · NIMH · UNIVERSITY OF PITTSBURGH AT PITTSBURGH · PI MACDONALD, MATTHEW L · 2015 to 2018
$631k
NIGMS NIH HHS R01 GM106084NIGMS NIH HHS R01 GM117207NIMH NIH HHS K01 MH107756
6 · The paper itself

Abstract

Exosomes represent a class of secreted biological vesicles, which have recently gained attention due to their function as intertissue and interorganism transporters of genetic materials, small molecules, lipids, and proteins. Although the protein constituents of these exosomes are often glycosylated, a large-scale characterization of the glycoproteome has not yet been completed. This study identified 3144 unique glycosylation events belonging to 378 glycoproteins and 604 unique protein sites of glycosylation. With these data, we investigated the level of glycan microheterogeneity within the urinary exosomes, finding on average 5.9 glycans per site. The glycan family abundance on individual proteins showed subtle differences, providing an additional level of molecular characterization compared to the unmodified proteome. Finally, we show protein site-specific changes in regard to the common urinary glycoprotein, uromodulin. While uromodulin is an individual case, these same site-specific analyses provide a way forward for developing diagnostic glycoprotein biomarkers with urine as a noninvasive biological fluid. This study represents an important first step in understanding the functional urinary glycoproteome.

Indexed as

ExosomesGlycoproteinsGlycosylationHumansProteomicsUrineGlycoproteins

Identifiers

PMID32985870
PMCPMC7875506
OpenAlexW3088865755

What OpenQuestion holds

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Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.