Evidence map›Paper›PMID 32985577›Full record

ArticleScientific reports2020

Genomic and experimental data provide new insights into luciferin biosynthesis and bioluminescence evolution in fireflies.

Ru Zhang, Jinwu He, Zhiwei Dong, Guichun Liu, Yuan Yin, Xinying Zhang, Qi Li, Yandong Ren, Yongzhi Yang, Wei Liu and 14 more

Open access · goldAbstract read
In one paragraph

Article in Scientific reports, 2020. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 15 papers.

0numbers the graph read from it
0cells of the map it votes in
15citing papers in PubMed
1.8field-weighted citation impact, top 15% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

15 citing papers in PubMed, 34 citations in OpenAlex.

  1. Article
  2. Article
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  4. Cloning and characterization of luciferase from an Asian firefly Pygoluciola qingyu and its comparison with other beetle luciferases.Photochemical & photobiological sciences : Official journal of the European Photochemistry Association and the European Society for Photobiology · 2024
    Article
  5. Genome assembly of Genji firefly (Nipponoluciola cruciata) reveals novel luciferase-like luminescent proteins without peroxisome targeting signal.DNA research : an international journal for rapid publication of reports on genes and genomes · 2024
    Article
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  9. Long-Read Genome Sequencing ofZoological studies · 2023
    Article
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

24 authors at 4 institutions in 1 country.

Ru Zhang *School of Ecology and Environment, Northwestern Polytechnical University, Xi'an, 710072, Shaanxi, China.
Jinwu He *School of Ecology and Environment, Northwestern Polytechnical University, Xi'an, 710072, Shaanxi, China.
Zhiwei Dong *State Key Laboratory of Genetic Resources and Evolution, Kunming Institute of Zoology, Chinese Academy of Sciences, Kunming, 650223, Yunnan, China.
Guichun Liu *State Key Laboratory of Genetic Resources and Evolution, Kunming Institute of Zoology, Chinese Academy of Sciences, Kunming, 650223, Yunnan, China.
Yuan Yin *School of Ecology and Environment, Northwestern Polytechnical University, Xi'an, 710072, Shaanxi, China.
Xinying Zhang *Institute of Zoology, Chinese Academy of Sciences, Beijing, China.
Qi Li *School of Ecology and Environment, Northwestern Polytechnical University, Xi'an, 710072, Shaanxi, China.
Yandong RenState Key Laboratory of Genetic Resources and Evolution, Kunming Institute of Zoology, Chinese Academy of Sciences, Kunming, 650223, Yunnan, China.
Yongzhi YangSchool of Ecology and Environment, Northwestern Polytechnical University, Xi'an, 710072, Shaanxi, China.
Wei LiuState Key Laboratory of Genetic Resources and Evolution, Kunming Institute of Zoology, Chinese Academy of Sciences, Kunming, 650223, Yunnan, China.
Xianqing ChenSchool of Ecology and Environment, Northwestern Polytechnical University, Xi'an, 710072, Shaanxi, China.
Wenhao XiaSchool of Ecology and Environment, Northwestern Polytechnical University, Xi'an, 710072, Shaanxi, China.
Kang DuanState Key Laboratory of Genetic Resources and Evolution, Kunming Institute of Zoology, Chinese Academy of Sciences, Kunming, 650223, Yunnan, China.
Fei HaoSchool of Ecology and Environment, Northwestern Polytechnical University, Xi'an, 710072, Shaanxi, China.
Zeshan LinSchool of Ecology and Environment, Northwestern Polytechnical University, Xi'an, 710072, Shaanxi, China.
Jie YangSchool of Ecology and Environment, Northwestern Polytechnical University, Xi'an, 710072, Shaanxi, China.
Zhou ChangState Key Laboratory of Genetic Resources and Evolution, Kunming Institute of Zoology, Chinese Academy of Sciences, Kunming, 650223, Yunnan, China.
Ruoping ZhaoState Key Laboratory of Genetic Resources and Evolution, Kunming Institute of Zoology, Chinese Academy of Sciences, Kunming, 650223, Yunnan, China.
Wenting WanSchool of Ecology and Environment, Northwestern Polytechnical University, Xi'an, 710072, Shaanxi, China.
Sihan LuSchool of Ecology and Environment, Northwestern Polytechnical University, Xi'an, 710072, Shaanxi, China.
Yanqiong PengCAS Key Laboratory of Tropical Forest Ecology, Xishuangbanna Tropical Botanical Garden, Chinese Academy of Sciences, Mengla, 666303, Yunnan, China.
Siqin GeInstitute of Zoology, Chinese Academy of Sciences, Beijing, China. gesq@ioz.ac.cn.
Wen WangSchool of Ecology and Environment, Northwestern Polytechnical University, Xi'an, 710072, Shaanxi, China. wwang@mail.kiz.ac.cn.
Xueyan LiState Key Laboratory of Genetic Resources and Evolution, Kunming Institute of Zoology, Chinese Academy of Sciences, Kunming, 650223, Yunnan, China. lixy@mail.kiz.ac.cn.
Chinese Academy of Sciences · CNNorthwestern Polytechnical University · CNInstitute of Zoology · CNKunming Institute of Zoology · CN

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Fireflies are among the most charismatic insects for their spectacular bioluminescence, but the origin and evolution of bioluminescence remain elusive. Especially, the genic basis of luciferin (D-luciferin) biosynthesis and light patterns is largely unknown. Here, we present the high-quality reference genomes of two fireflies Lamprigera yunnana (1053 Mb) and Abscondita terminalis (501 Mb) with great differences in both morphology and luminous behavior. We sequenced the transcriptomes and proteomes of luminous organs of two species. We created the CRISPR/Cas9-induced mutants of Abdominal B gene without luminous organs in the larvae of A. terminalis and sequenced the transcriptomes of mutants and wild-types. Combining gene expression analyses with comparative genomics, we propose a more complete luciferin synthesis pathway, and confirm the convergent evolution of bioluminescence in insects. Using experiments, the function of the firefly acyl-CoA thioesterase (ACOT1) to convert L-luciferin to D-luciferin was validated for the first time. Comparisons of three-dimension reconstruction of luminous organs and their differentially expressed genes among two species suggest that two positive genes in the calcium signaling pathway and structural difference of luminous organs may play an important role in the evolution of flash pattern. Altogether, our results provide important resources for further exploring bioluminescence in insects.

Indexed as

Biological EvolutionAnimalsFirefliesFirefly LuciferinProteomeSpecies SpecificityTranscriptomeFirefly LuciferinProteome

Identifiers

PMID32985577
PMCPMC7522259
OpenAlexW3088306281

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.