Evidence map›Paper›PMID 32985020›Full record

ArticleMolecular microbiology2021

A recently isolated human commensal Escherichia coli ST10 clone member mediates enhanced thermotolerance and tetrathionate respiration on a P1 phage-derived IncY plasmid.

Shady Mansour Kamal, Annika Cimdins-Ahne, Changhan Lee, Fengyang Li, Alberto J Martín-Rodríguez, Zaira Seferbekova, Robert Afasizhev, Haleluya Tesfaye Wami, Panagiotis Katikaridis, Lena Meins and 4 more

Open access · hybridAbstract read
In one paragraph

Article in Molecular microbiology, 2021. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 20 papers.

0numbers the graph read from it
0cells of the map it votes in
20citing papers in PubMed
3.6field-weighted citation impact, top 7% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

20 citing papers in PubMed, 33 citations in OpenAlex.

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  10. Cytoplasmic molecular chaperones in Pseudomonas species.Journal of microbiology (Seoul, Korea) · 2022
    Review
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  13. Removal of Extended-Spectrum Beta-Lactamase-ProducingInternational journal of environmental research and public health · 2022
    Article
  14. Article
  15. Article
  16. Article
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  18. Review
  19. Review
  20. Basic mechanism of the autonomous ClpG disaggregase.The Journal of biological chemistry
    Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

14 authors at 7 institutions in 4 countries.

Shady Mansour KamalDepartment of Microbiology, Tumor and Cell Biology, Karolinska Institutet, Stockholm, Sweden.ORCID 0000-0002-7565-811X
Annika Cimdins-AhneInstitute of Hygiene, University of Münster, Münster, Germany.ORCID 0000-0001-7414-9914
Changhan LeeDepartment of Microbiology, Tumor and Cell Biology, Karolinska Institutet, Stockholm, Sweden.ORCID 0000-0003-0327-4712
Fengyang LiDepartment of Microbiology, Tumor and Cell Biology, Karolinska Institutet, Stockholm, Sweden.ORCID 0000-0001-5102-6284
Alberto J Martín-RodríguezDepartment of Microbiology, Tumor and Cell Biology, Karolinska Institutet, Stockholm, Sweden.ORCID 0000-0003-2422-129X
Zaira SeferbekovaKharkevich Institute for Information Transmission Problems, RAS, Moscow, Russia.ORCID 0000-0002-3131-3697
Robert AfasizhevKharkevich Institute for Information Transmission Problems, RAS, Moscow, Russia.ORCID 0000-0002-3513-8873
Haleluya Tesfaye WamiInstitute of Hygiene, University of Münster, Münster, Germany.ORCID 0000-0002-9929-2570
Panagiotis KatikaridisCenter for Molecular Biology, University of Heidelberg (ZMBH), German Cancer Research Center (DKFZ), DKFZ-ZMBH Alliance, Heidelberg, Germany.ORCID 0000-0001-5783-1487
Lena MeinsCenter for Molecular Biology, University of Heidelberg (ZMBH), German Cancer Research Center (DKFZ), DKFZ-ZMBH Alliance, Heidelberg, Germany.ORCID 0000-0001-6214-477X
Heinrich LünsdorfHelmholtz Centre for Infection Research, Braunschweig, Germany.ORCID 0000-0003-2778-8611
Ulrich DobrindtInstitute of Hygiene, University of Münster, Münster, Germany.ORCID 0000-0001-9949-1898
Axel MogkCenter for Molecular Biology, University of Heidelberg (ZMBH), German Cancer Research Center (DKFZ), DKFZ-ZMBH Alliance, Heidelberg, Germany.ORCID 0000-0003-3674-5410
Ute RömlingDepartment of Microbiology, Tumor and Cell Biology, Karolinska Institutet, Stockholm, Sweden.ORCID 0000-0003-3812-6621
Karolinska Institutet · SEGerman Cancer Research Center · DEUniversity of Münster · DEFuture University in Egypt · EGHelmholtz Centre for Infection Research · DEInstitute for Information Transmission Problems · RULomonosov Moscow State University · RU

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

The ubiquitous human commensal Escherichia coli has been well investigated through its model representative E. coli K-12. In this work, we initially characterized E. coli Fec10, a recently isolated human commensal strain of phylogroup A/sequence type ST10. Compared to E. coli K-12, the 4.88 Mbp Fec10 genome is characterized by distinct single-nucleotide polymorphisms and acquisition of genomic islands. In addition, E. coli Fec10 possesses a 155.86 kbp IncY plasmid, a composite element based on phage P1. pFec10 harbours multiple cargo genes such as coding for a tetrathionate reductase and its corresponding regulatory two-component system. Among the cargo genes is also the Transmissible Locus of Protein Quality Control (TLPQC), which mediates tolerance to lethal temperatures in bacteria. The disaggregase ClpG

Indexed as

Bacteriophage P1BacteriophagesEscherichia coliGenome, BacterialGenomic IslandsHumansOxygen ConsumptionPlasmidsSymbiosisThermotolerancedisaggregase ClpGEscherichia coliIncY plasmidphylogenetic analysistetrathionate respirationthermotolerance

Identifiers

PMID32985020
PMCPMC7984374
OpenAlexW3088811706

What OpenQuestion holds

Textmetadata
LicenceCC BY-NC
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.