Evidence map›Paper›PMID 32981011›Full record

ArticleMolecular biology reports2020

Characterization of sexual size dimorphism and sex-biased genes expression profile in the olive flounder.

Jea-Woon Ryu, Jaeeun Jung, Kunhyang Park, Sugi Lee, Ilkyu Park, Woo-Jin Kim, Dae-Soo Kim

Abstract read
PubMed Publisher
In one paragraph

Article in Molecular biology reports, 2020. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 6 papers.

0numbers the graph read from it
0cells of the map it votes in
6citing papers in PubMed
1.3field-weighted citation impact, top 19% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

6 citing papers in PubMed, 13 citations in OpenAlex.

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  5. Updated Genome Assembly of Bighead Carp (Frontiers in genetics · 2021
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  6. Tissue-Specific Expression Pattern inFrontiers in genetics · 2021
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

7 authors at 2 institutions in 1 country.

Jea-Woon RyuDepartment of Environmental Disease Research Centers, Korea Research Institute of Bioscience and Biotechnology (KRIBB), 125 Gwahak-ro, Yuseong-gu, Daejeon, Korea.ORCID http://orcid.org/0000-0003-4208-4663
Jaeeun JungDepartment of Environmental Disease Research Centers, Korea Research Institute of Bioscience and Biotechnology (KRIBB), 125 Gwahak-ro, Yuseong-gu, Daejeon, Korea.ORCID http://orcid.org/0000-0001-5179-4603
Kunhyang ParkDepartment of Core Facility Management Center, Korea Research Institute of Bioscience and Biotechnology (KRIBB), 125 Gwahak-ro, Yuseong-gu, Daejeon, Korea.ORCID http://orcid.org/0000-0001-8545-1764
Sugi LeeDepartment of Environmental Disease Research Centers, Korea Research Institute of Bioscience and Biotechnology (KRIBB), 125 Gwahak-ro, Yuseong-gu, Daejeon, Korea.ORCID http://orcid.org/0000-0002-5441-1396
Ilkyu ParkDepartment of Environmental Disease Research Centers, Korea Research Institute of Bioscience and Biotechnology (KRIBB), 125 Gwahak-ro, Yuseong-gu, Daejeon, Korea.ORCID http://orcid.org/0000-0003-4819-7773
Woo-Jin KimGenetics and Breeding Research Center, National Institute of Fisheries Science (NIFS), Geojesi, 53334, Korea. wj2464@korea.kr.ORCID http://orcid.org/0000-0002-0921-2312
Dae-Soo KimDepartment of Environmental Disease Research Centers, Korea Research Institute of Bioscience and Biotechnology (KRIBB), 125 Gwahak-ro, Yuseong-gu, Daejeon, Korea. kds2465@kribb.re.kr.ORCID http://orcid.org/0000-0002-4999-1613
Korea Research Institute of Bioscience and Biotechnology · KRNational Institute of Fisheries Science · KR

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Sexual size dimorphism (SSD) is a widespread phenomenon in fish species, including in the olive flounder. Although it is well established that female olive flounders acquire more bone mass than males, the underlying mechanism and timing of this SSD remains controversial. Here, the gene expression profiles of adult male and female olive flounder fish were explored to better understand the SSD mechanisms. Using RNA sequencing, a total of 4784 sex-biased differentially expressed genes (DEGs) in the fin with asymptotic growth after maturity were identified, among which growth-related factors were found. Gene ontology and pathway enrichment studies were performed to predict potential SSD-related genes and their functions. According to functional analysis, negative regulation of cell proliferation was significantly enriched in males, and anabolism related genes were highly expressed in females. In addition, pathway analysis using the Kyoto Encyclopedia of Genes and Genomes database revealed that five sexual dimorphism-related candidate genes (bambia, smurf1, dvl2, cul1a, and dvl3) were enriched in osteogenesis-contributing pathways. These results suggest that these five candidate genes may be relevant for skeletal development in olive flounders. Altogether, this study adds new knowledge for a better understanding of SSD-related growth traits in olive flounder, which can be used for enhancing aquaculture productivity with reduced production costs.

Indexed as

Fish ProteinsFlounderGene Expression RegulationSex CharacteristicsTranscriptomeAnimalsBody SizeFemaleMaleFish ProteinsBody sizeOlive flounderOsteogenesisSex-biased gene expressionSexual size dimorphism

Identifiers

PMID32981011
OpenAlexW3088230919

What OpenQuestion holds

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Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.