Evidence map›Paper›PMID 32978454›Full record

ArticleScientific reports2020

A novel isoform of cryptochrome 4 (Cry4b) is expressed in the retina of a night-migratory songbird.

Angelika Einwich, Karin Dedek, Pranav Kumar Seth, Sascha Laubinger, Henrik Mouritsen

Open access · goldAbstract read
In one paragraph

Article in Scientific reports, 2020. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 17 papers, 1 of them a synthesis that pooled it.

0numbers the graph read from it
0cells of the map it votes in
17citing papers in PubMed, 1 pooled it
5.0field-weighted citation impact, top 5% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

17 citing papers in PubMed, 1 synthesis or guideline pooled it, 34 citations in OpenAlex.

  1. Pooled it
  2. Article
  3. Article
  4. Article
  5. Article
  6. Article
  7. Dimerization of European Robin Cryptochrome 4a.The journal of physical chemistry. B · 2023
    Article
  8. Upper bound for broadband radiofrequency field disruption of magnetic compass orientation in night-migratory songbirds.Proceedings of the National Academy of Sciences of the United States of America · 2023
    Article
  9. Magnetic field effects on radical pair reactions: estimation ofPhysical chemistry chemical physics : PCCP · 2023
    Article
  10. Article
  11. Article
  12. Magnetosensation.Journal of comparative physiology. A, Neuroethology, sensory, neural, and behavioral physiology · 2022
    Article
  13. Article
  14. Localisation of cryptochrome 2 in the avian retina.Journal of comparative physiology. A, Neuroethology, sensory, neural, and behavioral physiology · 2022
    Article
  15. Article
  16. Article
  17. Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

5 authors at 1 institution in 1 country.

Angelika EinwichInstitute for Biology and Environmental Sciences, Neurosensorics/Animal Navigation, Carl-von-Ossietzky-Universität Oldenburg, Oldenburg, Germany.
Karin DedekInstitute for Biology and Environmental Sciences, Neurosensorics/Animal Navigation, Carl-von-Ossietzky-Universität Oldenburg, Oldenburg, Germany.
Pranav Kumar SethInstitute for Biology and Environmental Sciences, Neurosensorics/Animal Navigation, Carl-von-Ossietzky-Universität Oldenburg, Oldenburg, Germany.
Sascha LaubingerInstitute for Biology and Environmental Sciences, Evolutionäre Genetik der Pflanzen, Carl-von-Ossietzky-Universität Oldenburg, Oldenburg, Germany.
Henrik MouritsenInstitute for Biology and Environmental Sciences, Neurosensorics/Animal Navigation, Carl-von-Ossietzky-Universität Oldenburg, Oldenburg, Germany. henrik.mouritsen@uni-oldenburg.de.
Carl von Ossietzky Universität Oldenburg · DE

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

The primary sensory molecule underlying light-dependent magnetic compass orientation in migratory birds has still not been identified. The cryptochromes are the only known class of vertebrate proteins which could mediate this mechanism in the avian retina. Cryptochrome 4 of the night-migratory songbird the European robin (Erithacus rubecula; erCry4) has several of the properties needed to be the primary magnetoreceptor in the avian eye. Here, we report on the identification of a novel isoform of erCry4, which we named erCry4b. Cry4b includes an additional exon of 29 amino acids compared to the previously described form of Cry4, now called Cry4a. When comparing the retinal circadian mRNA expression pattern of the already known isoform erCry4a and the novel erCry4b isoform, we find that erCry4a is stably expressed throughout day and night, whereas erCry4b shows a diurnal mRNA oscillation. The differential characteristics of the two erCry4 isoforms regarding their 24-h rhythmicity in mRNA expression leads us to suggest that they might have different functions. Based on the 24-h expression pattern, erCry4a remains the more likely cryptochrome to be involved in radical-pair-based magnetoreception, but at the present time, an involvement of erCry4b cannot be excluded.

Indexed as

Animal MigrationAnimalsCryptochromesOrientationProtein IsoformsRetinaSongbirdsCryptochromesProtein Isoforms

Identifiers

PMID32978454
PMCPMC7519125
OpenAlexW3088244850

What OpenQuestion holds

Textmetadata
LicenceCC BY
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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.