Evidence map›Paper›PMID 32978420›Full record

ArticleScientific reports2020

Visualizing the dynamics of exported bacterial proteins with the chemogenetic fluorescent reporter FAST.

Yankel Chekli, Caroline Peron-Cane, Dario Dell'Arciprete, Jean-François Allemand, Chenge Li, Jean-Marc Ghigo, Arnaud Gautier, Alice Lebreton, Nicolas Desprat, Christophe Beloin

Abstract read
In one paragraph

Article in Scientific reports, 2020. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 6 papers.

0numbers the graph read from it
0cells of the map it votes in
6citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

6 citing papers in PubMed.

  1. Article
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  3. Review
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

10 authors.

Yankel ChekliGenetics of Biofilms Laboratory, Institut Pasteur, UMR CNRS2001, 75015, Paris, France.
Caroline Peron-CaneLaboratoire de Physique de L'ENS, École Normale Supérieure, Université PSL, CNRS, Sorbonne Université, Université de Paris, 75005, Paris, France.
Dario Dell'ArcipreteLaboratoire de Physique de L'ENS, École Normale Supérieure, Université PSL, CNRS, Sorbonne Université, Université de Paris, 75005, Paris, France.
Jean-François AllemandLaboratoire de Physique de L'ENS, École Normale Supérieure, Université PSL, CNRS, Sorbonne Université, Université de Paris, 75005, Paris, France.
Chenge LiÉcole Normale Supérieure, Université PSL, CNRS, Laboratoire Des Biomolécules (LBM), Sorbonne Université, 75005, Paris, France.
Jean-Marc GhigoGenetics of Biofilms Laboratory, Institut Pasteur, UMR CNRS2001, 75015, Paris, France.
Arnaud GautierÉcole Normale Supérieure, Université PSL, CNRS, Laboratoire Des Biomolécules (LBM), Sorbonne Université, 75005, Paris, France.
Alice LebretonInstitut de Biologie de I'ENS (IBENS), École Normale Supérieure, CNRS, INSERM, Université PSL, 75005, Paris, France.
Nicolas DespratLaboratoire de Physique de L'ENS, École Normale Supérieure, Université PSL, CNRS, Sorbonne Université, Université de Paris, 75005, Paris, France. nicolas.desprat@phys.ens.fr.
Christophe BeloinGenetics of Biofilms Laboratory, Institut Pasteur, UMR CNRS2001, 75015, Paris, France. christophe.beloin@pasteur.fr.

Funding

European Research Council ERC-2016-CoG-724705Marie Curie MSCA-IF-2018
6 · The paper itself

Abstract

Bacterial proteins exported to the cell surface play key cellular functions. However, despite the interest to study the localisation of surface proteins such as adhesins, transporters or hydrolases, monitoring their dynamics in live imaging remains challenging, due to the limited availability of fluorescent probes remaining functional after secretion. In this work, we used the Escherichia coli intimin and the Listeria monocytogenes InlB invasin as surface exposed scaffolds fused with the recently developed chemogenetic fluorescent reporter protein FAST. Using both membrane permeant (HBR-3,5DM) and non-permeant (HBRAA-3E) fluorogens that fluoresce upon binding to FAST, we demonstrated that fully functional FAST can be exposed at the cell surface and used to specifically tag the external side of the bacterial envelop in both diderm and monoderm bacteria. Our work opens new avenues to study the organization and dynamics of the bacterial cell surface proteins.

Indexed as

Adhesins, BacterialBacterial ProteinsCell MembraneEscherichia coliEscherichia coli ProteinsListeria monocytogenesLuminescent MeasurementsLuminescent ProteinsAdhesins, BacterialBacterial ProteinsEscherichia coli ProteinsLuminescent Proteins

Identifiers

PMID32978420
PMCPMC7519654

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.