Evidence map›Paper›PMID 32978242›Full record

ArticleScience immunology2020

The myeloid type I interferon response to myocardial infarction begins in bone marrow and is regulated by Nrf2-activated macrophages.

David M Calcagno, Richard P Ng, Avinash Toomu, Claire Zhang, Kenneth Huang, Aaron D Aguirre, Ralph Weissleder, Lori B Daniels, Zhenxing Fu, Kevin R King

Open access · greenAbstract read
In one paragraph

Article in Science immunology, 2020. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 65 papers.

0numbers the graph read from it
0cells of the map it votes in
65citing papers in PubMed
3.7field-weighted citation impact, top 6% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

65 citing papers in PubMed, 101 citations in OpenAlex.

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  17. Target neutrophil heterogeneity and plasticity in cancer.Journal of hematology & oncology · 2025
    Review
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5 more citing papers are in PubMed but not listed here.

4 · The record

Corrections and comments

5 · Who and what money

Authors and funding

10 authors at 2 institutions in 1 country.

David M CalcagnoDepartment of Bioengineering, Jacobs School of Engineering, University of California San Diego, La Jolla, CA, USA.ORCID 0000-0001-7022-9220
Richard P NgDivision of Cardiology and Cardiovascular Institute, Department of Medicine, University of California San Diego, La Jolla, CA, USA.ORCID 0000-0002-0501-2911
Avinash ToomuDivision of Cardiology and Cardiovascular Institute, Department of Medicine, University of California San Diego, La Jolla, CA, USA.
Claire ZhangDepartment of Bioengineering, Jacobs School of Engineering, University of California San Diego, La Jolla, CA, USA.ORCID 0000-0002-4191-527X
Kenneth HuangDivision of Cardiology and Cardiovascular Institute, Department of Medicine, University of California San Diego, La Jolla, CA, USA.
Aaron D AguirreCardiology Division, Massachusetts General Hospital, Harvard Medical School, Boston, MA, USA.ORCID 0000-0002-5509-1646
Ralph WeisslederCenter for Systems Biology, Massachusetts General Hospital, Harvard Medical School, Boston, MA, USA.ORCID 0000-0003-0828-4143
Lori B DanielsDivision of Cardiology and Cardiovascular Institute, Department of Medicine, University of California San Diego, La Jolla, CA, USA.ORCID 0000-0002-4841-9922
Zhenxing FuDivision of Cardiology and Cardiovascular Institute, Department of Medicine, University of California San Diego, La Jolla, CA, USA.ORCID 0000-0002-5674-2105
Kevin R KingDepartment of Bioengineering, Jacobs School of Engineering, University of California San Diego, La Jolla, CA, USA. krking@ucsd.edu.ORCID 0000-0003-1472-2189
University of California San Diego · USHarvard University · US

Funding

UC San Diego Clinical and Translational Research InstituteUL1TR001442 · NCATS · UNIVERSITY OF CALIFORNIA, SAN DIEGO · PI FIRESTEIN, GARY S, HOGARTH, MICHAEL · 2015 to 2024
$88.3M
Integrative Bioengineering of Heart, Vessels, and BloodT32HL105373 · NHLBI · UNIVERSITY OF CALIFORNIA, SAN DIEGO · PI CHIEN, SHU, INTAGLIETTA, MARCOS · 2010 to 2019
$3.6M
Quantitative nanoparticle imaging of macrophagesR01HL131495 · NHLBI · MASSACHUSETTS GENERAL HOSPITAL · PI NAHRENDORF, MATTHIAS, WEISSLEDER, MD, PHD, RALPH · 2017 to 2020
$2.7M
Elucidating Cell Communication Networks during Tissue Inflammation, Fibrosis, and RegenerationDP2AR075321 · NIAMS · UNIVERSITY OF CALIFORNIA, SAN DIEGO · PI KING, KEVIN R · 2018 to 2018
$2.4M
Dynamic Single Cell Imaging of Coronary Microvascular Dysfunction in the Failing HeartR01HL144515 · NHLBI · MASSACHUSETTS GENERAL HOSPITAL · PI AGUIRRE, AARON D · 2019 to 2023
$2.1M
Imaging tumor associated macrophage (TAM) functionR01CA206890 · NCI · MASSACHUSETTS GENERAL HOSPITAL · PI PITTET, MIKAEL, WEISSLEDER, MD, PHD, RALPH · 2017 to 2021
$1.9M
Single Cell Imaging of the HeartR01HL122208 · NHLBI · MASSACHUSETTS GENERAL HOSPITAL · PI WEISSLEDER, MD, PHD, RALPH · 2014 to 2017
$1.7M
Danger Signaling and Spread of Injury after Myocardial InfarctionR00HL129168 · NHLBI · UNIVERSITY OF CALIFORNIA, SAN DIEGO · PI KING, KEVIN R · 2017 to 2019
$746k
NCATS NIH HHS UL1 TR001442NCI NIH HHS R01 CA206890NHLBI NIH HHS R00 HL129168NHLBI NIH HHS R01 HL122208NHLBI NIH HHS R01 HL131495NHLBI NIH HHS R01 HL144515NHLBI NIH HHS T32 HL105373NIAMS NIH HHS DP2 AR075321
6 · The paper itself

Abstract

Sterile tissue injury is thought to locally activate innate immune responses via damage-associated molecular patterns (DAMPs). Whether innate immune pathways are remotely activated remains relatively unexplored. Here, by analyzing ~145,000 single-cell transcriptomes at steady state and after myocardial infarction (MI) in mice and humans, we show that the type I interferon (IFN) response, characterized by expression of IFN-stimulated genes (ISGs), begins far from the site of injury, in neutrophil and monocyte progenitors within the bone marrow. In the peripheral blood of patients, we observed defined subsets of ISG-expressing neutrophils and monocytes. In the bone marrow and blood of mice, ISG expression was detected in neutrophils and monocytes and their progenitors, intensified with maturation at steady-state and after MI, and was controlled by Tet2 and Irf3 transcriptional regulators. Within the infarcted heart, ISG-expressing cells were negatively regulated by Nrf2 activation in Ccr2

Indexed as

AnimalsBone MarrowDioxygenasesDNA-Binding ProteinsFemaleHumansInterferon Regulatory Factor-3Interferon Type IMacrophagesMaleMice, Inbred C57BLMice, KnockoutMonocytesMyocardial InfarctionNeutrophilsNF-E2-Related Factor 2DioxygenasesDNA-Binding ProteinsIfnar2 protein, mouseInterferon Regulatory Factor-3Interferon Type IIrf3 protein, mouseNF-E2-Related Factor 2Receptor, Interferon alpha-betaTet2 protein, mouse

Identifiers

PMID32978242
PMCPMC7808338
OpenAlexW3088838534

What OpenQuestion holds

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.