Evidence map›Paper›PMID 32977759›Full record

ArticleBMC infectious diseases2020

Plasmid mediated penicillin and tetracycline resistance among Neisseria gonorrhoeae isolates from Kenya.

Mary Wandia Kivata, Margaret Mbuchi, Fredrick Eyase, Wallace Dimbuson Bulimo, Cecilia Katunge Kyanya, Valerie Oundo, Wilton Mwema Mbinda, Willy Sang, Ben Andagalu, Olusegun O Soge and 2 more

Open access · goldAbstract read
In one paragraph

Article in BMC infectious diseases, 2020. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 17 papers, 2 of them syntheses that pooled it.

0numbers the graph read from it
0cells of the map it votes in
17citing papers in PubMed, 2 pooled it
2.0field-weighted citation impact, top 14% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

17 citing papers in PubMed, 2 syntheses or guidelines pooled it, 30 citations in OpenAlex.

  1. Pooled it
  2. The frequency of mutations in theFrontiers in microbiology · 2024
    Pooled it
  3. Article
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  5. Review
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  7. Article
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  9. Article
  10. Tetracycline-resistantJAC-antimicrobial resistance · 2025
    Review
  11. Article
  12. Identification of Emerging Multidrug-ResistantMedical sciences (Basel, Switzerland) · 2023
    Article
  13. Review
  14. Review
  15. Article
  16. Article
  17. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

12 authors at 6 institutions in 2 countries.

Mary Wandia KivataInstitute for Biotechnology Research, Jomo Kenyatta University of Agriculture and Technology (JKUAT), P. O Box 62,000-00200, Thika, Kenya. marywandia086@gmail.com.ORCID http://orcid.org/0000-0001-6575-0118
Margaret MbuchiU.S. Army Medical Research Directorate-Africa, P. O Box 606, Village Market, Nairobi, 00621, Kenya. Margaret.mbuchi@usamru-k.org.
Fredrick EyaseInstitute for Biotechnology Research, Jomo Kenyatta University of Agriculture and Technology (JKUAT), P. O Box 62,000-00200, Thika, Kenya.
Wallace Dimbuson BulimoU.S. Army Medical Research Directorate-Africa, P. O Box 606, Village Market, Nairobi, 00621, Kenya.
Cecilia Katunge KyanyaU.S. Army Medical Research Directorate-Africa, P. O Box 606, Village Market, Nairobi, 00621, Kenya.
Valerie OundoU.S. Army Medical Research Directorate-Africa, P. O Box 606, Village Market, Nairobi, 00621, Kenya.
Wilton Mwema MbindaDepartment of Chemistry and Biochemistry, Pwani University, P. O Box 195-80108, Mombasa, Kenya.
Willy SangU.S. Army Medical Research Directorate-Africa, P. O Box 606, Village Market, Nairobi, 00621, Kenya.
Ben AndagaluU.S. Army Medical Research Directorate-Africa, P. O Box 606, Village Market, Nairobi, 00621, Kenya.
Olusegun O SogeDepartments of Global Health and Medicine, University of Washington, 325 9th Avenue, Box 359931, Seattle, WA, 98104, USA.
Raymond Scott McClellandDepartments of Medicine, Epidemiology, and Global Health, University of Washington, 325 9th Avenue, Box 359931, Seattle, WA, 98104, USA.
John DistelhorstU.S. Army Medical Research Directorate-Africa, P. O Box 606, Village Market, Nairobi, 00621, Kenya.
United States Army Medical Research Directorate - Africa · KEUniversity of Washington · USJomo Kenyatta University of Agriculture and Technology · KEKaratina University · KEPwani University · KEUniversity of Nairobi · KE

Funding

Global Emerging Infections Surveillance (GEIS)/Armed Forces Health Surveillance Branch ProMIS P0119_18_KY_012.06
6 · The paper itself

Abstract

backgroundTreatment of gonorrhea is complicated by the development of antimicrobial resistance in Neisseria gonorrhoeae (GC) to the antibiotics recommended for treatment. Knowledge on types of plasmids and the antibiotic resistance genes they harbor is useful in monitoring the emergence and spread of bacterial antibiotic resistance. In Kenya, studies on gonococcal antimicrobial resistance are few and data on plasmid mediated drug resistance is limited. The present study characterizes plasmid mediated resistance in N. gonorrhoeae isolates recovered from Kenya between 2013 and 2018.

methodsDNA was extracted from 36 sub-cultured GC isolates exhibiting varying drug resistance profiles. Whole genome sequencing was done on Illumina MiSeq platform and reads assembled de-novo using CLC Genomics Workbench. Genome annotation was performed using Rapid Annotation Subsystem Technology. Comparisons in identified antimicrobial resistance determinants were done using Bioedit sequence alignment editor.

resultsTwenty-four (66.7%) isolates had both β-lactamase (TEM) and TetM encoding plasmids. 8.3% of the isolates lacked both TEM and TetM plasmids and had intermediate to susceptible penicillin and tetracycline MICs. Twenty-six (72%) isolates harbored TEM encoding plasmids. 25 of the TEM plasmids were of African type while one was an Asian type. Of the 36 isolates, 31 (86.1%) had TetM encoding plasmids, 30 of which harbored American TetM, whereas 1 carried a Dutch TetM. All analyzed isolates had non-mosaic penA alleles. All the isolates expressing TetM were tetracycline resistant (MIC> 1 mg/L) and had increased doxycycline MICs (up to 96 mg/L). All the isolates had S10 ribosomal protein V57M amino acid substitution associated with tetracycline resistance. No relation was observed between PenB and MtrR alterations and penicillin and tetracycline MICs.

conclusionHigh-level gonococcal penicillin and tetracycline resistance in the sampled Kenyan regions was found to be mediated by plasmid borne blaTEM and tetM genes. While the African TEM plasmid, TEM1 and American TetM are the dominant genotypes, Asian TEM plasmid, a new TEM239 and Dutch TetM have emerged in the regions.

Indexed as

Anti-Bacterial Agentsbeta-LactamasesDNA, BacterialDrug Resistance, Multiple, BacterialFemaleGenotypeGonorrheaHumansKenyaMaleMicrobial Sensitivity TestsNeisseria gonorrhoeaePenicillinsPlasmidsTetracyclineTetracycline ResistanceAnti-Bacterial Agentsbeta-LactamasesDNA, BacterialPenicillinsTetracyclineblaTEMNeisseria gonorrhoeaePenicillinPlasmidtetMTetracycline

Identifiers

PMID32977759
PMCPMC7517623
OpenAlexW3088384977

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.