Evidence map›Paper›PMID 32977660›Full record

ArticleViruses2020

Comment: Mis-Genotyping of Some Hepatitis D Virus Genotype 2 and 5 Sequences Using HDVdb.

Caroline Charre, Frédéric le Gal, Paul Dény, Caroline Scholtès

Open access · goldAbstract read
PubMed Full text at PMC Publisher
In one paragraph

Article in Viruses, 2020. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Not yet cited in PubMed.

0numbers the graph read from it
0cells of the map it votes in
0citing papers in PubMed
–field-weighted citation impact, top 85% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

0 citing papers in PubMed, 1 citations in OpenAlex.

No citing paper in PubMed yet.

4 · The record

Corrections and comments

5 · Who and what money

Authors and funding

4 authors at 2 institutions in 1 country.

Caroline CharreUniversity of Lyon, University Claude Bernard Lyon 1 (UCBL1), 69008 Lyon, France.ORCID 0000-0002-4356-5146
Frédéric le GalLaboratoire de Microbiologie Clinique, Hôpitaux Universitaires de Paris Seine Saint-Denis, Site Avicenne, Université Sorbonne Paris Cité, 93022 Bobigny, France.
Paul DényUniversity of Lyon, University Claude Bernard Lyon 1 (UCBL1), 69008 Lyon, France.
Caroline ScholtèsUniversity of Lyon, University Claude Bernard Lyon 1 (UCBL1), 69008 Lyon, France.
Université Claude Bernard Lyon 1 · FRInserm · FR

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Evidence that Hepatitis D virus (HDV) genotype is involved in HDV infection pathogenesis is increasing. Indeed, HDV genotypes have been shown to be linked to different outcomes in terms of liver fibrosis and treatment response. Herein, we show that the promising HDVdb genotyping tool available online can lead to wrong genotyping results. The current HDVdb algorithm should be carefully considered as a "beta-version" and warrants algorithm core corrections, as soon as possible, for an optimal and beneficial use.

Indexed as

Genotyping TechniquesComputational BiologyDatabases, Nucleic AcidGenotypeHepatitis Delta VirusPhylogenySequence Analysis, RNAdatabaseerrorsgenotypinghepatitis delta virusmis-genotypingwebserver

Identifiers

PMID32977660
PMCPMC7598266
OpenAlexW3088361128

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.