Evidence map›Paper›PMID 32976483›Full record

ArticlePloS one2020

Transcriptome profiling helps to elucidate the mechanisms of ripening and epidermal senescence in passion fruit (Passiflora edulia Sims).

Changbao Li, Ming Xin, Li Li, Xuemei He, Guoming Liu, Jiemin Li, Jinfeng Sheng, Jian Sun

Open access · goldAbstract read
In one paragraph

Article in PloS one, 2020. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 9 papers.

0numbers the graph read from it
0cells of the map it votes in
9citing papers in PubMed
3.2field-weighted citation impact, top 8% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

9 citing papers in PubMed, 30 citations in OpenAlex.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

8 authors at 1 institution in 1 country.

Changbao LiInstitute of Agricultural Products Processing, Guangxi Academy of Agricultural Sciences, Guangxi, Nangning, China.
Ming XinInstitute of Agricultural Products Processing, Guangxi Academy of Agricultural Sciences, Guangxi, Nangning, China.ORCID 0000-0002-6046-3192
Li LiInstitute of Agricultural Products Processing, Guangxi Academy of Agricultural Sciences, Guangxi, Nangning, China.
Xuemei HeInstitute of Agricultural Products Processing, Guangxi Academy of Agricultural Sciences, Guangxi, Nangning, China.
Guoming LiuInstitute of Agricultural Products Processing, Guangxi Academy of Agricultural Sciences, Guangxi, Nangning, China.
Jiemin LiInstitute of Agricultural Products Processing, Guangxi Academy of Agricultural Sciences, Guangxi, Nangning, China.
Jinfeng ShengInstitute of Agricultural Products Processing, Guangxi Academy of Agricultural Sciences, Guangxi, Nangning, China.
Jian SunInstitute of Agricultural Products Processing, Guangxi Academy of Agricultural Sciences, Guangxi, Nangning, China.
Guangxi Academy of Agricultural Science · CN

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Passion fruit (Passiflora edulia Sims), an important tropical and subtropical species, is classified as a respiration climacteric fruit, and its quality deteriorates rapidly after harvest. To elucidate the mechanisms involved in ripening and rapid fruit senescence, phytochemical characteristic analysis and RNA sequencing were performed in purple passion fruit with different treatments, that is, 1-methylcyclopropene (1-MCP) and preservative film (PF). Comprehensive functional annotation and KEGG enrichment analysis showed that starch and sucrose metabolism, plant hormone signal transduction, phenylpropanoid biosynthesis, flavonoid biosynthesis, and carotenoid biosynthesis were involved in fruit ripening. Treatment with PF and 1-MCP significantly affected the transcription levels of passion fruit during postharvest storage. A large number of differentially expressed unigenes (DEGs) were identified as significantly enriched in starch and sucrose metabolism, plant hormone signal transduction and phenylpropanoid biosynthesis at the postharvest stage. The PF and 1-MCP treatments increased superoxide dismutase (SOD), catalase (CAT) and peroxidase (POD) gene expression levels and enzyme activities, accelerated lignin accumulation, and decreased β-galactosidase (β-Gal), polygalacturonase (PG) and cellulose activities and gene expression levels to delay cell wall degradation during fruit senescence. The RNA sequencing data for cell wall metabolism and hormone signal transduction pathway-related unigenes were verified by RT-qPCR. The results of this study indicate that the cell wall metabolism and hormone signaling pathways are closely related to passion fruit ripening. PF and 1-MCP treatment might inhibit ethylene signaling and regulate cell wall metabolism pathways to inhibit cell wall degradation. Our results demonstrate the involvement of ripening- and senescence-related networks in passion fruit ripening and may establish a foundation for future research investigating the effects of PF and 1-MCP treatment on fruit ripening.

Indexed as

Gene Expression Regulation, PlantTranscriptomeCyclopropanesFruitGene Expression ProfilingPassifloraPlant Growth RegulatorsPlant Proteins1-methylcyclopropeneCyclopropanesPlant Growth RegulatorsPlant Proteins

Identifiers

PMID32976483
PMCPMC7518611
OpenAlexW3088439563

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.