Evidence map›Paper›PMID 32975860›Full record

ArticleTraffic (Copenhagen, Denmark)2020

The Ubp3/Bre5 deubiquitylation complex modulates COPII vesicle formation.

Natalia Gomez-Navarro, Jérôme Boulanger, Elizabeth A Miller

Abstract read
In one paragraph

Article in Traffic (Copenhagen, Denmark), 2020. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 4 papers.

0numbers the graph read from it
0cells of the map it votes in
4citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

4 citing papers in PubMed.

  1. Article
  2. Article
  3. Article
  4. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

3 authors.

Natalia Gomez-NavarroCell Biology Division, MRC Laboratory of Molecular Biology, Cambridge, UK.
Jérôme BoulangerCell Biology Division, MRC Laboratory of Molecular Biology, Cambridge, UK.
Elizabeth A MillerCell Biology Division, MRC Laboratory of Molecular Biology, Cambridge, UK.ORCID 0000-0002-1033-8369

Funding

Medical Research Council MC_UP_1201/10
6 · The paper itself

Abstract

The appropriate delivery of secretory proteins to the correct subcellular destination is an essential cellular process. In the endoplasmic reticulum (ER), secretory proteins are captured into COPII vesicles that generally exclude ER resident proteins and misfolded proteins. We previously characterized a collection of yeast mutants that fail to enforce this sorting stringency and improperly secrete the ER chaperone, Kar2 (Copic et al., Genetics 2009). Here, we used the emp24Δ mutant strain that secretes Kar2 to identify candidate proteins that might regulate ER export, reasoning that loss of regulatory proteins would restore sorting stringency. We find that loss of the deubiquitylation complex Ubp3/Bre5 reverses all of the known phenotypes of the emp24Δ mutant, and similarly reverses Kar2 secretion of many other ER retention mutants. Based on a combination of genetic interactions and live cell imaging, we conclude that Ubp3 and Bre5 modulate COPII coat assembly at ER exit sites. Therefore, we propose that Ubp3/Bre5 influences the rate of vesicle formation from the ER that in turn can impact ER quality control events.

Indexed as

COP-Coated VesiclesSaccharomyces cerevisiae ProteinsEndopeptidasesEndoplasmic ReticulumProteinsProtein TransportSaccharomyces cerevisiaeEndopeptidasesProteinsSaccharomyces cerevisiae ProteinsUBP3 protein, S cerevisiaeBre5COPIIER export quality controlKar2Ubp3

Identifiers

PMID32975860
PMCPMC7711842

What OpenQuestion holds

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Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.