Evidence map›Paper›PMID 32974670›Full record

ArticleThe Journal of antimicrobial chemotherapy2021

In vitro cross-resistance to doravirine in a panel of HIV-1 clones harbouring multiple NNRTI resistance mutations.

Francesco Saladini, Federica Giammarino, Behnaz A Hosseini, Alessia Giannini, Adele Boccuto, Filippo Dragoni, Ilaria Vicenti, Robert W Shafer, Maurizio Zazzi

Open access · greenAbstract read
In one paragraph

Article in The Journal of antimicrobial chemotherapy, 2021. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 12 papers.

0numbers the graph read from it
0cells of the map it votes in
12citing papers in PubMed
0.4field-weighted citation impact, top 25% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

12 citing papers in PubMed, 20 citations in OpenAlex.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

9 authors at 2 institutions in 2 countries.

Francesco SaladiniDepartment of Medical Biotechnologies, University of Siena, Siena, Italy.
Federica GiammarinoDepartment of Medical Biotechnologies, University of Siena, Siena, Italy.
Behnaz A HosseiniDepartment of Medical Biotechnologies, University of Siena, Siena, Italy.
Alessia GianniniDepartment of Medical Biotechnologies, University of Siena, Siena, Italy.
Adele BoccutoDepartment of Medical Biotechnologies, University of Siena, Siena, Italy.
Filippo DragoniDepartment of Medical Biotechnologies, University of Siena, Siena, Italy.
Ilaria VicentiDepartment of Medical Biotechnologies, University of Siena, Siena, Italy.
Robert W ShaferStanford University, Stanford, CA, USA.
Maurizio ZazziDepartment of Medical Biotechnologies, University of Siena, Siena, Italy.
University of Siena · ITStanford University · US

Funding

HIV Drug Resistance DatabaseR24AI136618 · NIAID · STANFORD UNIVERSITY · PI ROBERT William SHAFER · 2018 to 2026
$7.3M
NIAID NIH HHS R24 AI136618
6 · The paper itself

Abstract

objectivesDoravirine is a recently licensed HIV-1 NNRTI with improved efficacy, pharmacokinetics and safety profile compared with efavirenz and limited cross-resistance with rilpivirine and etravirine. In this in vitro study, cross-resistance to doravirine was analysed in a representative panel of NNRTI-resistant clones.

methodsIn vitro phenotypic susceptibility to doravirine was assessed in 10 clinically derived infectious clones with intermediate- to high-level resistance to rilpivirine, etravirine, efavirenz and nevirapine, and in NL4-3 site-directed mutants harbouring K103N, Y181C, M230L or K103N/Y181C NNRTI mutations.

resultsAlthough none of the infectious clones harboured any of the major doravirine resistance-associated mutations (RAMs) included in the IAS-USA reference list, doravirine fold change (FC) values were comparable to or higher than those calculated for other NNRTIs, particularly etravirine and rilpivirine. As expected, single NNRTI mutations K103N and Y181C did not impair doravirine susceptibility (FC 1.4 and 1.8, respectively), while reduced activity was observed with the single M230L or double K103N/Y181C mutations (FC 7.6 and 4.9, respectively). Median FC values increased significantly with increasing numbers of NNRTI RAMs (P = 0.005) and were >10 in 4/4 and 1/4 clones harbouring four and three NNRTI RAMs, respectively. FC values correlated well with predicted susceptibility as inferred by Stanford HIV Drug Resistance Database (HIVdb) and ANRS algorithms (both P < 0.001).

conclusionsSubstantial cross-resistance to doravirine was detected in NNRTI-resistant viruses harbouring complex mutational patterns, even in the absence of major IAS-USA doravirine RAMs. Therefore, based on the simple IAS-USA reference list, doravirine resistance may be underestimated in viruses harbouring multiple NNRTI mutations.

Indexed as

Anti-HIV AgentsHIV-1HIV InfectionsClone CellsDrug Resistance, ViralHIV Reverse TranscriptaseHumansMutationNitrilesPyridonesPyrimidinesReverse Transcriptase InhibitorsTriazolesAnti-HIV AgentsdoravirineHIV Reverse TranscriptaseNitrilesPyridonesPyrimidinesReverse Transcriptase InhibitorsTriazoles

Identifiers

PMID32974670
PMCPMC8453390
OpenAlexW3088022191

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.