Evidence map›Paper›PMID 32974534›Full record

ArticleAccess microbiology2019

Identification and phylogenetic analysis of herpes simplex virus-1 from clinical isolates in India.

Dimpal A Nyayanit, Rima R Sahay, Gajanan N Sakpal, Anita M Shete, Gouri C Chaubal, Prasad Sarkale, Rashi Srivastava, Sreelekshmy Mohandas, Pragya D Yadav

Abstract read
In one paragraph

Article in Access microbiology, 2019. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 4 papers.

0numbers the graph read from it
0cells of the map it votes in
4citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

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Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

4 citing papers in PubMed.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

9 authors.

Dimpal A NyayanitICMR-National Institute of Virology, Pune, Maharashtra, India.
Rima R SahayICMR-National Institute of Virology, Pune, Maharashtra, India.
Gajanan N SakpalICMR-National Institute of Virology, Pune, Maharashtra, India.
Anita M SheteICMR-National Institute of Virology, Pune, Maharashtra, India.
Gouri C ChaubalICMR-National Institute of Virology, Pune, Maharashtra, India.
Prasad SarkaleICMR-National Institute of Virology, Pune, Maharashtra, India.
Rashi SrivastavaICMR-National Institute of Virology, Pune, Maharashtra, India.
Sreelekshmy MohandasICMR-National Institute of Virology, Pune, Maharashtra, India.
Pragya D YadavICMR-National Institute of Virology, Pune, Maharashtra, India.

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Human herpes simplex virus (HSV)-1 infection is acquired in childhood and persists throughout a person's lifetime. Here, we present two cases from India; one showing symptoms of postpartum haemorrhage with disseminated intravascular coagulation, and the second one showing signs of acute encephalitis syndrome. The aetiological agent in both cases was identified as HSV-1 using the PCR method. The next-generation sequencing method retrieved ~97 % of the viral genome from the isolates of the clinical samples. The phylogenetic analysis of the retrieved genomes revealed that they belong to clade II of HSV-1. This study identifies a few sequence variations in the glycoprotein region of HSV-1 during two different clinical manifestations. There are a couple of papers that analyse variations in the glycoprotein region of clinical samples. Further, this study also highlights the importance of considering HSV-1 during differential diagnosis when analysing the nosocomial infection.

Indexed as

clade IIglycoproteinsHerpes Simplex Virus-1Next-generation sequencing

Identifiers

PMID32974534
PMCPMC7470303

What OpenQuestion holds

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LicenceCC BY-NC
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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.