Evidence map›Paper›PMID 32974003›Full record

ArticleCell & bioscience2020

Immunoprecipitation and mass spectrometry define TET1 interactome during oligodendrocyte differentiation.

Ming Zhang, Kaixiang Zhang, Jian Wang, Yuming Liu, Guangxin Liu, Weilin Jin, Shengxi Wu, Xianghui Zhao

Open access · goldAbstract read
In one paragraph

Article in Cell & bioscience, 2020. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 5 papers.

0numbers the graph read from it
0cells of the map it votes in
5citing papers in PubMed
0.8field-weighted citation impact, top 30% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

5 citing papers in PubMed, 13 citations in OpenAlex.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

8 authors at 2 institutions in 1 country.

Ming ZhangDepartment of Neurobiology, School of Basic Medicine, Fourth Military Medical University, Xi'an, 710032 Shaanxi China.
Kaixiang ZhangDepartment of Neurobiology, School of Basic Medicine, Fourth Military Medical University, Xi'an, 710032 Shaanxi China.
Jian WangDepartment of Neurobiology, School of Basic Medicine, Fourth Military Medical University, Xi'an, 710032 Shaanxi China.
Yuming LiuDepartment of Neurobiology, School of Basic Medicine, Fourth Military Medical University, Xi'an, 710032 Shaanxi China.
Guangxin LiuDepartment of Neurobiology, School of Basic Medicine, Fourth Military Medical University, Xi'an, 710032 Shaanxi China.
Weilin JinSchool of Electronic, Information and Electrical Engineering, Shanghai Jiao Tong University, Shanghai, 200240 China.
Shengxi WuDepartment of Neurobiology, School of Basic Medicine, Fourth Military Medical University, Xi'an, 710032 Shaanxi China.
Xianghui ZhaoDepartment of Neurobiology, School of Basic Medicine, Fourth Military Medical University, Xi'an, 710032 Shaanxi China.ORCID 0000-0003-1165-0140
Air Force Medical University · CNShanghai Jiao Tong University · CN

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Ten-eleven translocation (TET) proteins, encoding dioxygenase for DNA hydroxymethylation, are important players in nervous system development and disease. In addition to their proverbial enzymatic role, TET proteins also possess non-enzymatic activity and function in multiple protein-protein interaction networks, which remains largely unknown during oligodendrocyte differentiation. To identify partners of TET1 in the myelinating cells, we performed proteome-wide analysis using co-immunoprecipitation coupled to mass spectrometry (IP-MS) in purified oligodendrocyte precursor cells (OPCs) and mature oligodendrocytes (mOLs), respectively. Following a stringent selection of MS data based on identification reliability and protein enrichment, we identified a core set of 1211 partners that specifically interact with TET1 within OPCs and OLs. Analysis of the biological process and pathways associated with TET1-interacting proteins indicates a significant enrichment of proteins involved in regulation of cellular protein localization, cofactor metabolic process and regulation of catabolic process, et al. We further validated TET1 interactions with selected partners. Overall, this comprehensive analysis of the endogenous TET1 interactome during oligodendrocyte differentiation suggest its novel mechanism in regulating oligodendrocyte homeostasis and provide comprehensive insight into the molecular pathways associated with TET1.

Indexed as

Co-immunoprecipitationDNA dioxygenaseMass spectrometryOligodendrocyteTET1

Identifiers

PMID32974003
PMCPMC7493855
OpenAlexW3086067884

What OpenQuestion holds

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.