Evidence map›Paper›PMID 32973200›Full record

ArticleScientific reports2020

Cell type specific gene expression profiling reveals a role for complement component C3 in neutrophil responses to tissue damage.

Ruth A Houseright, Emily E Rosowski, Pui-Ying Lam, Sebastien J M Tauzin, Oscar Mulvaney, Colin N Dewey, Anna Huttenlocher

Open access · goldAbstract read
In one paragraph

Article in Scientific reports, 2020. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 18 papers.

0numbers the graph read from it
0cells of the map it votes in
18citing papers in PubMed
1.4field-weighted citation impact, top 18% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

18 citing papers in PubMed, 25 citations in OpenAlex.

  1. Article
  2. Article
  3. Article
  4. Article
  5. Emerging roles for complement in lung transplantation.The Journal of clinical investigation · 2025
    Review
  6. Article
  7. CXCR3-CXCL11 Signaling Restricts Angiogenesis and Promotes Pericyte Recruitment.Arteriosclerosis, thrombosis, and vascular biology · 2024
    Article
  8. Review
  9. Review
  10. Article
  11. Cells · 2022
    Article
  12. Review
  13. Article
  14. Article
  15. Article
  16. Trap-TRAP, a Versatile Tool for Tissue-Specific Translatomics in Zebrafish.Frontiers in cell and developmental biology · 2021
    Article
  17. Article
  18. Zebrafish Embryo Infection Model to InvestigateFrontiers in cellular and infection microbiology · 2021
    Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

7 authors at 4 institutions in 1 country.

Ruth A HouserightDepartment of Pathobiological Sciences, University of Wisconsin-Madison, Madison, WI, USA.
Emily E RosowskiDepartment of Biological Sciences, Clemson University, Clemson, SC, USA.
Pui-Ying LamDepartment of Pharmacology and Toxicology, University of Utah, Orem, UT, USA.
Sebastien J M TauzinDepartment of Biology, Utah Valley University, Orem, UT, USA.
Oscar MulvaneyDepartment of Genetics, University of Wisconsin-Madison, Madison, WI, USA.
Colin N DeweyDepartment of Biostatistics and Medical Informatics, University of Wisconsin-Madison, Madison, WI, USA.
Anna HuttenlocherDepartment of Medical Microbiology and Immunology, University of Wisconsin-Madison, Madison, WI, USA. huttenlocher@wisc.edu.
University of Wisconsin–Madison · USClemson University · USUniversity of Utah · USUtah Valley University · US

Funding

University of Wisconsin Institute for Clinical and Translational ResearchUL1TR002373 · NCATS · UNIVERSITY OF WISCONSIN-MADISON · PI ELIZABETH S BURNSIDE, Allan R. Brasier · 2017 to 2026
$75.9M
RESEARCH TRAINING IN HEMATOLOGYT32HL007899 · NHLBI · UNIVERSITY OF WISCONSIN-MADISON · PI Jane Ellen Churpek · 1998 to 2026
$8.2M
Cell migration and wound repairR35GM118027 · NIGMS · UNIVERSITY OF WISCONSIN-MADISON · PI Anna Huttenlocher · 2016 to 2026
$7.5M
NCATS NIH HHS UL1 TR002373NHLBI NIH HHS T32 HL007899NIGMS NIH HHS R35 GM118027
6 · The paper itself

Abstract

Tissue damage induces rapid recruitment of leukocytes and changes in the transcriptional landscape that influence wound healing. However, the cell-type specific transcriptional changes that influence leukocyte function and tissue repair have not been well characterized. Here, we employed translating ribosome affinity purification (TRAP) and RNA sequencing, TRAP-seq, in larval zebrafish to identify genes differentially expressed in neutrophils, macrophages, and epithelial cells in response to wounding. We identified the complement pathway and c3a.1, homologous to the C3 component of human complement, as significantly increased in neutrophils in response to wounds. c3a.1

Indexed as

AnimalsComplement C3Gene Expression ProfilingLarvaNeutrophilsSequence Analysis, RNASignal TransductionWound HealingZebrafishZebrafish ProteinsComplement C3Zebrafish Proteins

Identifiers

PMID32973200
PMCPMC7518243
OpenAlexW3088445957

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.