Evidence map›Paper›PMID 32972671›Full record

ArticleArtificial intelligence in medicine2020

Rule-based automatic diagnosis of thyroid nodules from intraoperative frozen sections using deep learning.

Yuan Li, Pingjun Chen, Zhiyuan Li, Hai Su, Lin Yang, Dingrong Zhong

Open access · greenAbstract read
In one paragraph

Article in Artificial intelligence in medicine, 2020. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 19 papers, 1 of them a synthesis that pooled it.

0numbers the graph read from it
0cells of the map it votes in
19citing papers in PubMed, 1 pooled it
3.8field-weighted citation impact, top 5% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

19 citing papers in PubMed, 1 synthesis or guideline pooled it, 47 citations in OpenAlex.

  1. [Frozen section in oncologic endocrine surgery].Chirurgie (Heidelberg, Germany) · 2025
    Pooled it
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  5. Machine learning is changing osteoporosis detection: an integrative review.Osteoporosis international : a journal established as result of cooperation between the European Foundation for Osteoporosis and the National Osteoporosis Foundation of the USA · 2025
    Review
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  13. Pathomic Features Reveal Immune and Molecular Evolution From Lung Preneoplasia to Invasive Adenocarcinoma.Modern pathology : an official journal of the United States and Canadian Academy of Pathology, Inc · 2023
    Article
  14. Article
  15. Review
  16. Review
  17. Trends in AI-powered Classification of Thyroid Neoplasms Based on Histopathology Images - a Systematic Review.Acta informatica medica : AIM : journal of the Society for Medical Informatics of Bosnia & Herzegovina : casopis Drustva za medicinsku informatiku BiH · 2023
    Article
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

6 authors at 3 institutions in 2 countries.

Yuan LiDepartment of Pathology, Peking Union Medical College Hospital, China.
Pingjun ChenJ. Crayton Pruitt Family Department of Biomedical Engineering, University of Florida, USA.
Zhiyuan LiDepartment of Pathology, Peking Union Medical College Hospital, China.
Hai SuJ. Crayton Pruitt Family Department of Biomedical Engineering, University of Florida, USA.
Lin YangJ. Crayton Pruitt Family Department of Biomedical Engineering, University of Florida, USA. Electronic address: lin.yang@bme.ufl.edu.
Dingrong ZhongDepartment of Pathology, China-Japan Friendship Hospital, China. Electronic address: 748803069@qq.com.
University of Florida · USPeking Union Medical College Hospital · CNChina-Japan Friendship Hospital · CN

Funding

Development and Dissemination of MuscleMiner: An Imaging Informatics Tool for MusR01AR065479 · NIAMS · UNIVERSITY OF FLORIDA · PI DING, MINGZHOU · 2014 to 2018
$1.8M
NIAMS NIH HHS R01 AR065479
6 · The paper itself

Abstract

Frozen sections provide a basis for rapid intraoperative diagnosis that can guide surgery, but the diagnoses often challenge pathologists. Here we propose a rule-based system to differentiate thyroid nodules from intraoperative frozen sections using deep learning techniques. The proposed system consists of three components: (1) automatically locating tissue regions in the whole slide images (WSIs), (2) splitting located tissue regions into patches and classifying each patch into predefined categories using convolutional neural networks (CNN), and (3) integrating predictions of all patches to form the final diagnosis with a rule-based system. To be specific, we fine-tune the InceptionV3 model for thyroid patch classification by replacing the last fully connected layer with three outputs representing the patch's probabilities of being benign, uncertain, or malignant. Moreover, we design a rule-based protocol to integrate patches' predictions to form the final diagnosis, which provides interpretability for the proposed system. On 259 testing slides, the system correctly predicts 95.3% (61/64) of benign nodules and 96.7% (148/153) of malignant nodules, and classify 16.2% (42/259) slides as uncertain, including 19 benign and 16 malignant slides, which are a sufficiently small number to be manually examined by pathologists or fully processed through permanent sections. Besides, the system allows the localization of suspicious regions along with the diagnosis. A typical whole slide image, with 80, 000 × 60, 000 pixels, can be diagnosed within 1 min, thus satisfying the time requirement for intraoperative diagnosis. To the best of our knowledge, this is the first study to apply deep learning to diagnose thyroid nodules from intraoperative frozen sections. The code is released at https://github.com/PingjunChen/ThyroidRule.

Indexed as

Deep LearningThyroid NoduleFrozen SectionsHumansNeural Networks, ComputerProbabilityDeep learningFrozen sectionRule-based protocolThyroid noduleWhole slide image

Identifiers

PMID32972671
PMCPMC9527708
OpenAlexW3047859491

What OpenQuestion holds

Textmetadata
LicenceTDM
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.