Evidence map›Paper›PMID 32968023›Full record

ArticleProceedings of the National Academy of Sciences of the United States of America2020

Longin R-SNARE is retrieved from the plasma membrane by ANTH domain-containing proteins in

Masaru Fujimoto, Kazuo Ebine, Kohji Nishimura, Nobuhiro Tsutsumi, Takashi Ueda

Open access · bronzeAbstract read
In one paragraph

Article in Proceedings of the National Academy of Sciences of the United States of America, 2020. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 13 papers.

0numbers the graph read from it
0cells of the map it votes in
13citing papers in PubMed
2.0field-weighted citation impact, top 14% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

13 citing papers in PubMed, 30 citations in OpenAlex.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

5 authors at 3 institutions in 1 country.

Masaru FujimotoGraduate School of Agricultural and Life Sciences, The University of Tokyo, 113-8657 Tokyo, Japan.ORCID 0000-0002-7723-656X
Kazuo EbineDivision of Cellular Dynamics, National Institute for Basic Biology, 444-8585 Okazaki, Japan.ORCID 0000-0003-3020-7208
Kohji NishimuraDepartment of Molecular and Functional Genomics, Interdisciplinary Center for Science Research, Organization of Research, Shimane University, 690-8504 Matsue, Japan.ORCID 0000-0001-8796-6569
Nobuhiro TsutsumiLaboratory of Plant Molecular Genetics, Graduate School of Agricultural and Life Sciences, The University of Tokyo, 113-8657 Tokyo, Japan.ORCID 0000-0002-2610-6837
Takashi UedaDivision of Cellular Dynamics, National Institute for Basic Biology, 444-8585 Okazaki, Japan; tueda@nibb.ac.jp.ORCID 0000-0002-5190-892X
National Institute for Basic Biology · JPThe University of Tokyo · JPShimane University · JP

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

The plasma membrane (PM) acts as the interface between intra- and extracellular environments and exhibits a tightly regulated molecular composition. The composition and amount of PM proteins are regulated by balancing endocytic and exocytic trafficking in a cargo-specific manner, according to the demands of specific cellular states and developmental processes. In plant cells, retrieval of membrane proteins from the PM depends largely on clathrin-mediated endocytosis (CME). However, the mechanisms for sorting PM proteins during CME remain ambiguous. In this study, we identified a homologous pair of ANTH domain-containing proteins, PICALM1a and PICALM1b, as adaptor proteins for CME of the secretory vesicle-associated longin-type R-SNARE VAMP72 group. PICALM1 interacted with the SNARE domain of VAMP72 and clathrin at the PM. The loss of function of PICALM1 resulted in faulty retrieval of VAMP72, whereas general endocytosis was not considerably affected by this mutation. The double mutant of

Indexed as

ArabidopsisCell MembraneClathrinEndocytosisEukaryotaExocytosisGene Expression Regulation, PlantMembrane ProteinsPlant CellsProtein DomainsProtein TransportR-SNARE ProteinsClathrinMembrane ProteinsR-SNARE ProteinsANTH domainclathrin-mediated endocytosisPICALM1SNARE

Identifiers

PMID32968023
PMCPMC7547277
OpenAlexW3089146426

What OpenQuestion holds

Textmetadata
LicenceCC BY-NC-ND
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.