Evidence map›Paper›PMID 32967967›Full record

ArticleThe Journal of biological chemistry2020

The cation diffusion facilitator protein MamM's cytoplasmic domain exhibits metal-type dependent binding modes and discriminates against Mn

Shiran Barber-Zucker, Jenny Hall, Afonso Froes, Sofiya Kolusheva, Fraser MacMillan, Raz Zarivach

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Article in The Journal of biological chemistry, 2020. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 5 papers.

0numbers the graph read from it
0cells of the map it votes in
5citing papers in PubMed
0.4field-weighted citation impact, top 39% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

5 citing papers in PubMed, 8 citations in OpenAlex.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

6 authors at 2 institutions in 2 countries.

Shiran Barber-ZuckerDepartment of Life Sciences, Ben-Gurion University of the Negev, Beer Sheva, Israel; The National Institute for Biotechnology in the Negev, Ben-Gurion University of the Negev, Beer Sheva, Israel; Ilse Katz Institute for Nanoscale Science and Technology, Ben-Gurion University of the Negev, Beer Sheva, Israel.
Jenny HallHenry Wellcome Unit for Biological EPR, School of Chemistry, University of East Anglia, Norwich, United Kingdom.
Afonso FroesHenry Wellcome Unit for Biological EPR, School of Chemistry, University of East Anglia, Norwich, United Kingdom.
Sofiya KolushevaIlse Katz Institute for Nanoscale Science and Technology, Ben-Gurion University of the Negev, Beer Sheva, Israel.
Fraser MacMillanHenry Wellcome Unit for Biological EPR, School of Chemistry, University of East Anglia, Norwich, United Kingdom. Electronic address: Fraser.MacMillan@uea.ac.uk.
Raz ZarivachDepartment of Life Sciences, Ben-Gurion University of the Negev, Beer Sheva, Israel; The National Institute for Biotechnology in the Negev, Ben-Gurion University of the Negev, Beer Sheva, Israel; Ilse Katz Institute for Nanoscale Science and Technology, Ben-Gurion University of the Negev, Beer Sheva, Israel. Electronic address: zarivach@bgu.ac.il.
Ben-Gurion University of the Negev · ILUniversity of East Anglia · GB

Funding

Biotechnology and Biological Sciences Research Council BB/M011216/1
6 · The paper itself

Abstract

Cation diffusion facilitator (CDF) proteins are a conserved family of divalent transition metal cation transporters. CDF proteins are usually composed of two domains: the transmembrane domain, in which the metal cations are transported through, and a regulatory cytoplasmic C-terminal domain (CTD). Each CDF protein transports either one specific metal or multiple metals from the cytoplasm, and it is not known whether the CTD takes an active regulatory role in metal recognition and discrimination during cation transport. Here, the model CDF protein MamM, an iron transporter from magnetotactic bacteria, was used to probe the role of the CTD in metal recognition and selectivity. Using a combination of biophysical and structural approaches, the binding of different metals to MamM CTD was characterized. Results reveal that different metals bind distinctively to MamM CTD in terms of their binding sites, thermodynamics, and binding-dependent conformations, both in crystal form and in solution, which suggests a varying level of functional discrimination between CDF domains. Furthermore, these results provide the first direct evidence that CDF CTDs play a role in metal selectivity. We demonstrate that MamM's CTD can discriminate against Mn

Indexed as

Bacterial ProteinsBinding SitesCalorimetryCationsCation Transport ProteinsCrystallography, X-RayDimerizationMagnetospirillumManganeseMetalsMolecular Dynamics SimulationProtein DomainsProtein Structure, QuaternarySpectrometry, FluorescenceThermodynamicsBacterial ProteinsCationsCation Transport ProteinsManganeseMetalscation diffusion facilitatorelectron paramagnetic resonance (EPR)magnetotactic bacteriametal ion-protein interactionmetalloproteinmetal selectivitystructure-functionX-ray crystallography

Identifiers

PMID32967967
PMCPMC7864060
OpenAlexW3087802514

What OpenQuestion holds

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.