Evidence map›Paper›PMID 32967615›Full record

ArticleBMC gastroenterology2020

Effects of proton pump inhibitor use on the esophageal microbial community.

Sadia Tasnim, Aaron L Miller, Daniel C Jupiter, Catherine F Hamilton, Gabriel L Reep, Timothy S Krill, Richard B Pyles, Ikenna C Okereke

Open access · goldAbstract read
In one paragraph

Article in BMC gastroenterology, 2020. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 7 papers.

0numbers the graph read from it
0cells of the map it votes in
7citing papers in PubMed
1.6field-weighted citation impact, top 16% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

7 citing papers in PubMed, 12 citations in OpenAlex.

  1. The Microbiome and Esophageal Disease: Where Are We Now?Current gastroenterology reports · 2026
    Review
  2. Proton pump inhibitor exposure modulates functional and transcriptional responses inFrontiers in cellular and infection microbiology · 2026
    Article
  3. Proton Pump Inhibitors Modulate Gene Expression Profile in Esophageal Mucosa and Microbiome.The journal of pediatric pharmacology and therapeutics : JPPT : the official journal of PPAG · 2023
    Article
  4. Review
  5. Review
  6. Article
  7. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

8 authors at 1 institution in 1 country.

Sadia TasnimDivision of Cardiothoracic Surgery, University of Texas Medical Branch, 301 University Blvd, Galveston, TX, 77555, USA.
Aaron L MillerDepartment of Microbiology and Immunology, University of Texas Medical Branch, Galveston, TX, USA.
Daniel C JupiterDepartment of Preventive Medicine and Population Health, University of Texas Medical Branch, Galveston, TX, USA.
Catherine F HamiltonDivision of Cardiothoracic Surgery, University of Texas Medical Branch, 301 University Blvd, Galveston, TX, 77555, USA.
Gabriel L ReepDivision of Gastroenterology, University of Texas Medical Branch, Galveston, TX, USA.
Timothy S KrillDivision of Gastroenterology, University of Texas Medical Branch, Galveston, TX, USA.
Richard B PylesDepartment of Microbiology and Immunology, University of Texas Medical Branch, Galveston, TX, USA.
Ikenna C OkerekeDivision of Cardiothoracic Surgery, University of Texas Medical Branch, 301 University Blvd, Galveston, TX, 77555, USA. ikokerek@utmb.edu.ORCID http://orcid.org/0000-0001-5652-985X
The University of Texas Medical Branch at Galveston · US

Funding

UTMB Clinical and Translational Science AwardUL1TR001439 · NCATS · UNIVERSITY OF TEXAS MED BR GALVESTON · PI URBAN, RANDALL J · 2015 to 2024
$40.0M
UTMB Clinical and Translational Science AwardKL2TR001441 · NCATS · UNIVERSITY OF TEXAS MED BR GALVESTON · PI AMEREDES, BILL T · 2015 to 2024
$4.0M
NCATS NIH HHS KL2 TR001441NCATS NIH HHS UL1 TR001439NCATS NIH HHS UL1TR001439NIH HHS KL2TR001441
6 · The paper itself

Abstract

backgroundChanges in the esophageal microbiome correlate with esophageal disease, but the effects of proton pump inhibitor (PPI) drugs are incompletely characterized. Our objective was to identify the effects of PPI use on the microbial community of the esophagus.

methodsMucosal biopsies of the distal esophagus were analyzed using a customized esophageal microbiome qPCR panel array (EMB). Patient demographics, use of PPIs, duration of use and dose were recorded.

resultsFifty-eight patients were included. Mean age was 60.5 years. Ninety percent (52/58) of patients were on PPIs. Mean dose was 42.7 mg. Mean duration of use was 2.5 years. The use of PPIs led to a significant difference in absolute levels of only one organism, Actinomyces, in the entire array (p < 0.01). Among patients who used proton pump inhibitors, there was no significant association between dose and absolute levels of any organism. Similarly, there was no association between duration of use and absolute levels of any organism.

conclusionsPPI use does not seem to cause significant changes in the distal esophageal microbial community. Future studies with larger sample sizes and esophageal pH testing should be performed to determine the level of acidity and its relationship to the microbial community.

Indexed as

Gastroesophageal RefluxMicrobiotaHeartburnHumansMiddle AgedProton Pump InhibitorsProton Pump InhibitorsDose effectMicrobiomeProton pump inhibitor

Identifiers

PMID32967615
PMCPMC7513526
OpenAlexW3087767243

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.