Evidence map›Paper›PMID 32966825›Full record

ArticleJournal of theoretical biology2021

An ensemble mixed effects model of sleep loss and performance.

Courtney Cochrane, Demba Ba, Elizabeth B Klerman, Melissa A St Hilaire

Open access · greenAbstract read
In one paragraph

Article in Journal of theoretical biology, 2021. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 6 papers.

0numbers the graph read from it
0cells of the map it votes in
6citing papers in PubMed
2.1field-weighted citation impact, top 12% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

6 citing papers in PubMed, 15 citations in OpenAlex.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

4 authors at 2 institutions in 1 country.

Courtney CochraneJohn A. Paulson School of Engineering, Harvard University, Cambridge, MA, USA.
Demba BaJohn A. Paulson School of Engineering, Harvard University, Cambridge, MA, USA.
Elizabeth B KlermanDepartment of Medicine Division of Sleep and Circadian Disorders, Brigham and Women's Hospital, Boston, MA, USA; Division of Sleep Medicine, Harvard Medical School, Boston, MA, USA; Department of Neurology, Massachusetts General Hospital, Boston, MA, USA.
Melissa A St HilaireDepartment of Medicine Division of Sleep and Circadian Disorders, Brigham and Women's Hospital, Boston, MA, USA; Division of Sleep Medicine, Harvard Medical School, Boston, MA, USA. Electronic address: msthilaire@rics.bwh.harvard.edu.
Brigham and Women's Hospital · USHarvard University · US

Funding

Zoledronic Acid in Treatment of Osteoporosis in PostmenoM01RR002635 · NCRR · BRIGHAM AND WOMEN'S HOSPITAL · PI GARBER, JUDY E. · 1985 to 2008
$48.4M
TRANSPLANTATION ANALYSIS OF CIRCADIAN RHYTHMS AND AGINGP01AG009975 · NIA · BRIGHAM AND WOMEN'S HOSPITAL · PI QUAN, STUART F. · 1991 to 2018
$23.1M
TRAINING IN SLEEP, CIRCADIAN &RESPIRATORY NEUROBIOLOGYT32HL007901 · NHLBI · BRIGHAM AND WOMEN'S HOSPITAL · PI Charles A Czeisler · 1998 to 2026
$18.5M
Oregon Clinical and Translational Research Institute KL2 SupplementKL2TR002370 · NCATS · OREGON HEALTH & SCIENCE UNIVERSITY · PI Catherine Lee Hough · 2017 to 2026
$10.1M
Influence of sleep regularity on circadian rhythms, learning, performance, and moodR01HL128538 · NHLBI · BRIGHAM AND WOMEN'S HOSPITAL · PI KLERMAN, ELIZABETH B. · 2016 to 2019
$3.6M
Sleep duration required to restore performance during chronic sleep restrictionR01HL114088 · NHLBI · BRIGHAM AND WOMEN'S HOSPITAL · PI KLERMAN, ELIZABETH B. · 2012 to 2015
$3.1M
Multi-scale modeling of sleep behaviors in social networksR01GM105018 · NIGMS · BRIGHAM AND WOMEN'S HOSPITAL · PI CZEISLER, CHARLES A, KLERMAN, ELIZABETH B. · 2013 to 2017
$2.4M
Sleep Duration Required to Restore Performance during Chronic Sleep RestrictionK24HL105664 · NHLBI · MASSACHUSETTS GENERAL HOSPITAL · PI KLERMAN, ELIZABETH B. · 2010 to 2019
$1.8M
Effects of Light and Melatonin on Contractions in Pregnant WomenR21HD086392 · NICHD · BRIGHAM AND WOMEN'S HOSPITAL · PI KLERMAN, ELIZABETH B. · 2016 to 2017
$488k
Influence of Meal Timing and Sleep Variability on Macronutrient Intake and Body Composition in College UndergraduatesF32DK107146 · NIDDK · BRIGHAM AND WOMEN'S HOSPITAL · PI MCHILL, ANDREW WILLIAM · 2016 to 2017
$58k
NCATS NIH HHS KL2 TR002370NCRR NIH HHS M01 RR002635NHLBI NIH HHS K24 HL105664NHLBI NIH HHS R01 HL114088NHLBI NIH HHS R01 HL128538NHLBI NIH HHS T32 HL007901NIA NIH HHS P01 AG009975NICHD NIH HHS R21 HD086392NIDDK NIH HHS F32 DK107146NIGMS NIH HHS R01 GM105018
6 · The paper itself

Abstract

Sleep loss causes decrements in cognitive performance, which increases risks to those in safety-sensitive fields, including medicine and aviation. Mathematical models can be formulated to predict performance decrement in response to sleep loss, with the goal of identifying when an individual may be at highest risk for an accident. This work produces an Ensemble Mixed Effects Model that combines a traditional Linear Mixed Effects (LME) model with a semi-parametric, nonlinear model called Mixed Effects Random Forest (MERF). Using this model, we predict performance on the Psychomotor Vigilance Task (PVT), a test of sustained attention, using biologically motivated features extracted from a dataset containing demographic, sleep, and cognitive test data from 44 healthy participants studied during inpatient sleep loss laboratory experiments. Our Ensemble Mixed Effects Model accurately predicts an individual's trend in PVT performance, and fits the data better than prior published models. The ensemble successfully combines MERF's high rate of peak identification with LME's conservative predictions. We investigate two questions relevant to this model's potential use in operational settings: the tradeoff between additional model features versus ease of collecting these features in real-world settings, and how recent a cognitive task must have been administered to produce strong predictions. This work addresses limitations of previous approaches by developing a predictive model that accounts for interindividual differences and utilizes a nonlinear, semi-parametric method called MERF. We methodologically address the modeling decisions required for this prediction problem, including the choice of cross-validation method. This work is novel in its use of data from a highly-controlled inpatient study protocol that uncouples the influence of the sleep-wake cycle from the endogenous circadian rhythm on the cognitive task being modeled. This uncoupling provides a clearer picture of the model's real-world predictive ability for situations in which people work at different circadian times (e.g., night- or shift-work).

Indexed as

Sleep DeprivationWakefulnessAttentionCircadian RhythmHumansPsychomotor PerformanceSleepEnsemble mixed effects modelsHumanIndividual differencesMachine learningPsychomotor vigilance taskSleep loss

Identifiers

PMID32966825
PMCPMC8631086
OpenAlexW3087581460

What OpenQuestion holds

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Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.