Evidence map›Paper›PMID 32963330›Full record

SynthesisThe pharmacogenomics journal2021

HLA-B*39:01:01 is a novel risk factor for antithyroid drug-induced agranulocytosis in Japanese population.

Saya Nakakura, Kazuyoshi Hosomichi, Shinya Uchino, Akiko Murakami, Akira Oka, Ituro Inoue, Hirofumi Nakaoka

Abstract readMeta-Analysis
PubMed Publisher
In one paragraph

Synthesis in The pharmacogenomics journal, 2021. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 5 papers.

0numbers the graph read from it
0cells of the map it votes in
5citing papers in PubMed
0.7field-weighted citation impact, top 25% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

5 citing papers in PubMed, 6 citations in OpenAlex.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

7 authors at 4 institutions in 1 country.

Saya NakakuraHuman Genetics Laboratory, National Institute of Genetics, Mishima, Japan.
Kazuyoshi HosomichiDepartment of Bioinformatics and Genomics, Graduate School of Advanced Preventive Medical Sciences, Kanazawa University, Kanazawa, Japan.
Shinya UchinoDepartment of Surgery, Noguchi Thyroid Clinic and Hospital Foundation, Beppu, Japan.
Akiko MurakamiDepartment of Research and Clinical Laboratory, Noguchi Thyroid Clinic and Hospital Foundation, Beppu, Japan.
Akira OkaThe Institute of Medical Sciences, Tokai University, Isehara, Japan.
Ituro InoueHuman Genetics Laboratory, National Institute of Genetics, Mishima, Japan.
Hirofumi NakaokaHuman Genetics Laboratory, National Institute of Genetics, Mishima, Japan. h-nakaoka@po.kyoundo.jp.ORCID http://orcid.org/0000-0002-8454-1159
National Institute of Genetics · JPNoguchi Thyroid Clinic and Hospital Foundation · JPKanazawa University · JPTokai University · JP

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Antithyroid drug (ATD) is a mainstay of Graves' disease (GD). About 0.1-0.5% of patients with GD treated with ATD exhibit ATD-induced agranulocytosis, which is characterized by severe reduction of circulating neutrophils. Immune-mediated responses have been proposed as a possible mechanism for the pathogenesis of ATD-induced agranulocytosis. Although it has been reported that the HLA class II allele (HLA-DRB1*08:03) was associated with ATD-induced agranulocytosis in multiple populations, the entire HLA region have not been explored in Japanese. Therefore, we performed HLA sequencing for 10 class I and 11 class II genes in 87 patients with ATD-induced agranulocytosis and 384 patients with GD who did not show ATD-induced agranulocytosis. By conducting case-control association studies at the HLA allele and haplotype levels, we replicated the association between HLA-DRB1*08:03:02 and ATD-induced agranulocytosis (P = 5.2 × 10

Indexed as

AgranulocytosisAllelesAntithyroid AgentsFemaleGene FrequencyGenetic Association StudiesGraves DiseaseHaplotypesHLA-DRB1 ChainsHumansJapanMaleNeutrophilsRisk FactorsAntithyroid AgentsHLA-DRB1 Chains

Identifiers

PMID32963330
OpenAlexW3088612994

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.