Evidence map›Paper›PMID 32961840›Full record

ArticlePlants (Basel, Switzerland)2020

Seed Transcriptome Annotation Reveals Enhanced Expression of Genes Related to ROS Homeostasis and Ethylene Metabolism at Alternating Temperatures in Wild Cardoon.

Hector R Huarte, Giuseppe D Puglia, Andrey D Prjibelski, Salvatore A Raccuia

Open access · goldAbstract read
In one paragraph

Article in Plants (Basel, Switzerland), 2020. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 8 papers.

0numbers the graph read from it
0cells of the map it votes in
8citing papers in PubMed
2.3field-weighted citation impact, top 11% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

8 citing papers in PubMed, 16 citations in OpenAlex.

  1. Article
  2. Review
  3. Review
  4. Article
  5. Review
  6. Article
  7. Article
  8. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

4 authors at 3 institutions in 3 countries.

Hector R HuarteCONICET/Faculty of Agricultural Sciences, National University of Lomas de Zamora, 1836 Llavallol, Argentina.
Giuseppe D PugliaInstitute for Agricultural and Forestry Systems in the Mediterranean (ISAFoM), Department of Biology, Agriculture and Food Science (DiSBA), National Research Council (CNR), Via Empedocle, 58, 95128 Catania, Italy.ORCID 0000-0002-2327-3613
Andrey D PrjibelskiCenter for Algorithmic Biotechnology, Institute of Translational Biomedicine, St. Petersburg State University, 199004 St. Petersburg, Russia.ORCID 0000-0003-2816-4608
Salvatore A RaccuiaInstitute for Agricultural and Forestry Systems in the Mediterranean (ISAFoM), Department of Biology, Agriculture and Food Science (DiSBA), National Research Council (CNR), Via Empedocle, 58, 95128 Catania, Italy.
Istituto per il Sistema Produzione Animale in Ambiente Mediterraneo · ITConsejo Nacional de Investigaciones Científicas y Técnicas · ARSt Petersburg University · RU

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

The association among environmental cues, ethylene response, ABA signaling, and reactive oxygen species (ROS) homeostasis in the process of seed dormancy release is nowadays well-established in many species. Alternating temperatures are recognized as one of the main environmental signals determining dormancy release, but their underlying mechanisms are scarcely known. Dry after-ripened wild cardoon achenes germinated poorly at a constant temperature of 20, 15, or 10 °C, whereas germination was stimulated by 80% at alternating temperatures of 20/10 °C. Using an RNA-Seq approach, we identified 23,640 and annotated 14,078 gene transcripts expressed in dry achenes and achenes exposed to constant or alternating temperatures. Transcriptional patterns identified in dry condition included seed reserve and response to dehydration stress genes (i.e.,

Indexed as

antioxidantsdormancy terminationenvironmental signalsethylene signalinggene expressionRNA-Seq

Identifiers

PMID32961840
PMCPMC7570316
OpenAlexW3086333574

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.