Evidence map›Paper›PMID 32961663›Full record

ArticleMolecules (Basel, Switzerland)2020

Orientation Matters: Polarization Dependent IR Spectroscopy of Collagen from Intact Tendon Down to the Single Fibril Level.

Gorkem Bakir, Benoit E Girouard, Richard Wiens, Stefan Mastel, Eoghan Dillon, Mustafa Kansiz, Kathleen M Gough

Open access · goldAbstract read
In one paragraph

Article in Molecules (Basel, Switzerland), 2020. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 14 papers.

0numbers the graph read from it
0cells of the map it votes in
14citing papers in PubMed
2.3field-weighted citation impact, top 12% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

14 citing papers in PubMed, 47 citations in OpenAlex.

  1. Review
  2. Article
  3. Article
  4. Nano-Infrared Imaging and Spectroscopy of Animal Cells in Liquid Environment.Small (Weinheim an der Bergstrasse, Germany) · 2025
    Article
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  11. In vitro investigation of protein assembly by combined microscopy and infrared spectroscopy at the nanometer scale.Proceedings of the National Academy of Sciences of the United States of America · 2022
    Article
  12. Article
  13. Review
  14. Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

7 authors at 1 institution in 1 country.

Gorkem BakirDepartment of Chemistry, University of Manitoba, Winnipeg, MB R3T 2N2, Canada.ORCID 0000-0002-1998-2927
Benoit E GirouardDepartment of Chemistry, University of Manitoba, Winnipeg, MB R3T 2N2, Canada.
Richard WiensDepartment of Chemistry, University of Manitoba, Winnipeg, MB R3T 2N2, Canada.
Stefan Mastelneaspec GmbH, Eglfinger Weg 2, 85540 Munich-Haar, Germany.
Eoghan DillonPhotothermal Spectroscopy Corp., 325 Chapala St, Santa Barbara, CA 93101, USA.
Mustafa KansizPhotothermal Spectroscopy Corp., 325 Chapala St, Santa Barbara, CA 93101, USA.
Kathleen M GoughDepartment of Chemistry, University of Manitoba, Winnipeg, MB R3T 2N2, Canada.
University of Manitoba · CA

Funding

Natural Sciences and Engineering Research Council of Canada G00319912University of Manitoba GRAU3
6 · The paper itself

Abstract

Infrared (IR) spectroscopy has been used for decades to study collagen in mammalian tissues. While many changes in the spectral profiles appear under polarized IR light, the absorption bands are naturally broad because of tissue heterogeneity. A better understanding of the spectra of ordered collagen will aid in the evaluation of disorder in damaged collagen and in scar tissue. To that end, collagen spectra have been acquired with polarized far-field (FF) Fourier Transform Infrared (FTIR) imaging with a Focal Plane Array detector, with the relatively new method of FF optical photothermal IR (O-PTIR), and with nano-FTIR spectroscopy based on scattering-type scanning near-field optical microscopy (s-SNOM). The FF methods were applied to sections of intact tendon with fibers aligned parallel and perpendicular to the polarized light. The O-PTIR and nano-FTIR methods were applied to individual fibrils of 100-500 nm diameter, yielding the first confirmatory and complementary results on a biopolymer. We observed that the Amide I and II bands from the fibrils were narrower than those from the intact tendon, and that both relative intensities and band shapes were altered. These spectra represent reliable profiles for normal collagen type I fibrils of this dimension, under polarized IR light, and can serve as a benchmark for the study of collagenous tissues.

Indexed as

Spectroscopy, Fourier Transform InfraredAnimalsCollagen Type IMicroscopyNanotechnologySignal-To-Noise RatioTendonsCollagen Type Iadvances in IR imagingcollagen type Ifar-field infrared spectroscopyfibrilsnano-FTIR spectroscopyoptical photothermal spectroscopy (O-PTIR)polarization imaging and spectroscopyscattering-type scanning near-field optical microscopy (s-SNOM)tendon

Identifiers

PMID32961663
PMCPMC7571167
OpenAlexW3087677777

What OpenQuestion holds

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LicenceCC BY
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Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.