Evidence map›Paper›PMID 32961651›Full record

ArticleInternational journal of molecular sciences2017

Genome-Wide Identification of the PHD-Finger Family Genes and Their Responses to Environmental Stresses in

Mingzhe Sun, Bowei Jia, Junkai Yang, Na Cui, Yanming Zhu, Xiaoli Sun

Open access · goldAbstract read
In one paragraph

Article in International journal of molecular sciences, 2017. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 20 papers.

0numbers the graph read from it
0cells of the map it votes in
20citing papers in PubMed
4.1field-weighted citation impact, top 7% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

20 citing papers in PubMed, 28 citations in OpenAlex.

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  7. Transcriptome wide identification, characterization and expression analysis of PHD gene family inPhysiology and molecular biology of plants : an international journal of functional plant biology · 2024
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  10. Review
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  12. Frontiers in plant science · 2022
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  20. Loci and candidate genes in soybean that confer resistance to Fusarium graminearum.TAG. Theoretical and applied genetics. Theoretische und angewandte Genetik · 2019
    Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

6 authors at 3 institutions in 2 countries.

Mingzhe SunKey Laboratory of Agricultural Biological Functional Gene, College of Life Science, Northeast Agricultural University, Harbin 150038, China.
Bowei JiaKey Laboratory of Agricultural Biological Functional Gene, College of Life Science, Northeast Agricultural University, Harbin 150038, China.ORCID 0000-0003-1399-0886
Junkai YangCrop Stress Molecular Biology Laboratory, College of Agronomy, Heilongjiang Bayi Agricultural University, Daqing 163319, China.
Na CuiLGPM, CentraleSupélec, Université Paris-Saclay, SFR Condorcet FR CNRS 3417, Centre Européen de Biotechnologie et de Bioéconomie (CEBB), 3 rue des Rouges Terres, 51110 Pomacle, France.
Yanming ZhuKey Laboratory of Agricultural Biological Functional Gene, College of Life Science, Northeast Agricultural University, Harbin 150038, China.
Xiaoli SunCrop Stress Molecular Biology Laboratory, College of Agronomy, Heilongjiang Bayi Agricultural University, Daqing 163319, China.ORCID 0000-0003-1134-3976
Northeast Agricultural University · CNHeilongjiang Bayi Agricultural University · CNCentre National de la Recherche Scientifique · FR

Funding

National Natural Science Foundation of China 31500204National Natural Science Foundation of China 31671596Natural Science Foundation of Heilongjiang Province C2015035Postdoctoral Science Foundation of Heilongjiang Province LBHZ15186Startup Foundation of Heilongjiang Bayi Agricultural University XYB2015-01
6 · The paper itself

Abstract

The PHD-finger family has been demonstrated to be involved in regulating plant growth and development. However, little information is given for its role in environmental stress responses. Here, we identified a total of 59 PHD family genes in the rice genome. These OsPHDs genes were located on eleven chromosomes and synteny analysis only revealed nine duplicated pairs within the rice PHD family. Phylogenetic analysis of all OsPHDs and PHDs from other species revealed that they could be grouped into two major clusters. Furthermore, OsPHDs were clustered into eight groups and members from different groups displayed a great divergence in terms of gene structure, functional domains and conserved motifs. We also found that with the exception of

Indexed as

environmental stressevolutionary divergenceexpression analysisOryza sativaPHD-finger transcription factors

Identifiers

PMID32961651
PMCPMC5618654
OpenAlexW2755787008

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.