Evidence map›Paper›PMID 32958756›Full record

ArticleNature communications2020

Whole genome analysis of water buffalo and global cattle breeds highlights convergent signatures of domestication.

Prasun Dutta, Andrea Talenti, Rachel Young, Siddharth Jayaraman, Rebecca Callaby, Santosh Kumar Jadhav, Velu Dhanikachalam, Mayakannan Manikandan, Bhim B Biswa, Wai Y Low and 11 more

Open access · goldAbstract readComparative Study
In one paragraph

Article in Nature communications, 2020. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 47 papers.

0numbers the graph read from it
0cells of the map it votes in
47citing papers in PubMed
9.4field-weighted citation impact, top 2% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

47 citing papers in PubMed, 103 citations in OpenAlex.

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  9. Domestication drives repeated evolution of sexual-asexual life cycle trade-offs in yeast.Proceedings of the National Academy of Sciences of the United States of America · 2026
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

21 authors at 8 institutions in 5 countries.

Prasun Dutta *The Roslin Institute, University of Edinburgh, Easter Bush, Midlothian, EH25 9RG, UK.
Andrea Talenti *The Roslin Institute, University of Edinburgh, Easter Bush, Midlothian, EH25 9RG, UK.ORCID http://orcid.org/0000-0003-1309-3667
Rachel YoungThe Roslin Institute, University of Edinburgh, Easter Bush, Midlothian, EH25 9RG, UK.ORCID http://orcid.org/0000-0002-7904-7260
Siddharth JayaramanThe Roslin Institute, University of Edinburgh, Easter Bush, Midlothian, EH25 9RG, UK.ORCID http://orcid.org/0000-0003-1524-2232
Rebecca CallabyThe Roslin Institute, University of Edinburgh, Easter Bush, Midlothian, EH25 9RG, UK.ORCID http://orcid.org/0000-0002-6613-6037
Santosh Kumar JadhavBAIF Development Research Foundation, Central Research Station, Uruli Kanchan, Pune, Maharashtra, 412202, India.
Velu DhanikachalamBAIF Development Research Foundation, Central Research Station, Uruli Kanchan, Pune, Maharashtra, 412202, India.
Mayakannan ManikandanCentre for Cellular and Molecular Biology, Habsiguda, Uppal Road, Hyderabad, Telangana, 500007, India.ORCID http://orcid.org/0000-0002-6659-8987
Bhim B BiswaCentre for Cellular and Molecular Biology, Habsiguda, Uppal Road, Hyderabad, Telangana, 500007, India.ORCID http://orcid.org/0000-0002-5582-3982
Wai Y LowDavies Research Centre, School of Animal and Veterinary Sciences, University of Adelaide, Roseworthy, SA, 5371, Australia.ORCID http://orcid.org/0000-0002-0749-765X
John L WilliamsDavies Research Centre, School of Animal and Veterinary Sciences, University of Adelaide, Roseworthy, SA, 5371, Australia.ORCID http://orcid.org/0000-0001-5188-7957
Elizabeth CookInternational Livestock Research Institute (ILRI), Nairobi, 30709-00100, Kenya.ORCID http://orcid.org/0000-0001-6081-8363
Phil ToyeInternational Livestock Research Institute (ILRI), Nairobi, 30709-00100, Kenya.
Eileen WallScotland's Rural College (SRUC), Easter Bush, Midlothian, Edinburgh, EH25 9RG, UK.
Appolinaire DjikengCentre for Tropical Livestock Genetics and Health, Easter Bush, Midlothian, EH25 9RG, UK.
Karen MarshallInternational Livestock Research Institute (ILRI), Nairobi, 30709-00100, Kenya.
Alan L ArchibaldThe Roslin Institute, University of Edinburgh, Easter Bush, Midlothian, EH25 9RG, UK.ORCID http://orcid.org/0000-0001-9213-1830
Suresh GokhaleBAIF Development Research Foundation, Central Research Station, Uruli Kanchan, Pune, Maharashtra, 412202, India.
Satish KumarCentre for Cellular and Molecular Biology, Habsiguda, Uppal Road, Hyderabad, Telangana, 500007, India.
David A HumeMater Research Institute-University of Queensland, Translational Research Institute, Woolloongabba, QLD 4102, Australia. david.hume@uq.edu.au.
James G D PrendergastThe Roslin Institute, University of Edinburgh, Easter Bush, Midlothian, EH25 9RG, UK. james.prendergast@roslin.ed.ac.uk.
Roslin Institute · GBInternational Livestock Research Institute · KEBAIF Development Research Foundation · INCentre for Cellular and Molecular Biology · INScotland's Rural College · GBThe University of Adelaide · AUTranslational Research Institute · AUUniversità Cattolica del Sacro Cuore · IT

Funding

Biotechnology and Biological Sciences Research Council BBS/E/D/10002071Biotechnology and Biological Sciences Research Council BBS/E/D/30002275
6 · The paper itself

Abstract

More people globally depend on the water buffalo than any other domesticated species, and as the most closely related domesticated species to cattle they can provide important insights into the shared evolutionary basis of domestication. Here, we sequence the genomes of 79 water buffalo across seven breeds and compare patterns of between breed selective sweeps with those seen for 294 cattle genomes representing 13 global breeds. The genomic regions under selection between cattle breeds significantly overlap regions linked to stature in human genetic studies, with a disproportionate number of these loci also shown to be under selection between water buffalo breeds. Investigation of potential functional variants in the water buffalo genome identifies a rare example of convergent domestication down to the same mutation having independently occurred and been selected for across domesticated species. Cross-species comparisons of recent selective sweeps can consequently help identify and refine important loci linked to domestication.

Indexed as

DomesticationAnimalsBreedingBuffaloesCattleEvolution, MolecularGenetic LociGenetic VariationGenomePhenotypePhylogeographySelection, Genetic

Identifiers

PMID32958756
PMCPMC7505982
OpenAlexW3087218240

What OpenQuestion holds

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.