ReviewDevelopment (Cambridge, England)2020
FaceBase 3: analytical tools and FAIR resources for craniofacial and dental research.
Open access · bronzeAbstract readReview
In one paragraph
Review in Development (Cambridge, England), 2020. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 36 papers.
0numbers the graph read from it
0cells of the map it votes in
36citing papers in PubMed
4.3field-weighted citation impact, top 5% of its field
What it found
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The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.
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Who cites it
36 citing papers in PubMed, 55 citations in OpenAlex.
- Ethical Considerations for Clinical Data Sharing in Craniofacial Research: Recommendations From a Multidisciplinary Working Group.The Cleft palate-craniofacial journal : official publication of the American Cleft Palate-Craniofacial Association · 2026Article
- Evidence that disruption of Discoidin domain receptor 2 contributes to palate malformations through effects on the extracellular matrix.Human molecular genetics · 2026Article
- Craniofacial Dysmorphology Associated With Phelan-McDermid Syndrome Using Three-Dimensional Morphometrics.Clinical genetics · 2026Article
- Gene expression dynamics of human and mouse craniofacial development at the single-cell level.Nature communications · 2026Article
- Engineering bioinspired, high-density collagen microgels with tunable intrafibrillar mineralization for accelerated osteogenesis in vitro and bone regeneration in vivo.Acta biomaterialia · 2026Article
- Predicting Physical Appearance from Low Template: State of the Art and Future Perspectives.Genes · 2026Review
- The craniofacial shape of modern humans embodies genomic signatures of evolution, diversity, and clinical conditions.bioRxiv : the preprint server for biology · 2026Article
- A dual role for GLI3 signaling in neural crest development.Development (Cambridge, England) · 2026Article
- Article
- KMT2D Regulates Tooth Enamel Development.Journal of dental research · 2025Article
- Gene Expression Analysis of (Paired) Primary and Relapsed Wilms Tumor Samples to Unravel the Underlying Factors Driving Tumor Recurrence.Cancer medicine · 2025Article
- Exploring the association between SNPs and facial morphology in a Spanish population.Scientific reports · 2025Article
- Forensic DNA phenotyping: a review on SNP panels, genotyping techniques, and prediction models.Forensic sciences research · 2025Review
- Gene expression patterns of the developing human face at single cell resolution reveal cell type contributions to normal facial variation and disease risk.bioRxiv : the preprint server for biology · 2025Article
- KMT2D regulates tooth enamel development.bioRxiv : the preprint server for biology · 2024Article
- Computational Methods for Image Analysis in Craniofacial Development and Disease.Journal of dental research · 2024Review
- Exploring Eye, Hair, and Skin Pigmentation in a Spanish Population: Insights from Hirisplex-S Predictions.Genes · 2024Article
- Charting facial growth and development for Bantu Africans: Central tendencies, variational properties and sexual dimorphisms.Journal of anatomy · 2024Article
- Tendon-associated gene expression precedes osteogenesis in mid-palatal suture establishment.bioRxiv : the preprint server for biology · 2024Article
- A commoneLife · 2024Article
Corrections and comments
PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.
Authors and funding
39 authors at 14 institutions in 2 countries.
Bridget D SamuelsCenter for Craniofacial Molecular Biology, Herman Ostrow School of Dentistry, University of Southern California, Los Angeles, CA 90033, USA.ORCID 0000-0003-2712-1008
Robert AhoProgram in Craniofacial Biology, Departments of Orofacial Sciences and of Anatomy, Institute of Human Genetics, University of California San Francisco, San Francisco, CA 94143, USA.
James F BrinkleyStructural Informatics Group, Department of Biological Structure, University of Washington, Seattle, WA 98195, USA.
Alejandro BugacovInformation Sciences Institute, Viterbi School of Engineering, University of Southern California, Marina del Rey, CA 90292, USA.
Eleanor FeingoldDepartment of Human Genetics, Graduate School of Public Health, University of Pittsburgh, Pittsburgh, PA 15219, USA.
Shannon FisherDepartment of Pharmacology and Experimental Therapeutics, Boston University School of Medicine, Boston, MA 02118, USA.
Ana S Gonzalez-ReicheDepartment of Genetics and Genomic Sciences, Icahn School of Medicine at Mount Sinai, New York, NY 10029, USA.
Joseph G HaciaDepartment of Biochemistry and Molecular Medicine, Keck School of Medicine, University of Southern California, Los Angeles, CA 90033, USA.
Benedikt HallgrimssonDepartment of Cell Biology and Anatomy, Alberta Children's Hospital Research Institute, and McCaig Bone and Joint Institute, University of Calgary, Alberta, Canada.ORCID 0000-0002-7192-9103
Karissa HansenProgram in Craniofacial Biology, Departments of Orofacial Sciences and of Anatomy, Institute of Human Genetics, University of California San Francisco, San Francisco, CA 94143, USA.ORCID 0000-0003-0352-5980
Matthew P HarrisDepartment of Orthopedic Research, Boston Children's Hospital and Department of Genetics, Harvard Medical School, Boston, MA 02115, USA.
Thach-Vu HoCenter for Craniofacial Molecular Biology, Herman Ostrow School of Dentistry, University of Southern California, Los Angeles, CA 90033, USA.
Greg HolmesDepartment of Genetics and Genomic Sciences, Icahn School of Medicine at Mount Sinai, New York, NY 10029, USA.
Joan E HooperDepartment of Cell and Developmental Biology, School of Medicine, University of Colorado, Aurora, CO 80045, USA.
Ethylin Wang JabsDepartment of Genetics and Genomic Sciences, Icahn School of Medicine at Mount Sinai, New York, NY 10029, USA.
Kenneth L JonesDepartment of Biochemistry and Molecular Genetics, School of Medicine, University of Colorado, Aurora, CO 80045, USA.
Carl KesselmanInformation Sciences Institute, Viterbi School of Engineering, University of Southern California, Marina del Rey, CA 90292, USA.
Ophir D KleinProgram in Craniofacial Biology, Departments of Orofacial Sciences and Pediatrics, Institute for Human Genetics, University of California San Francisco, San Francisco, CA 94143, USA.
Elizabeth J LeslieDepartment of Human Genetics, Emory University, Atlanta, GA 30322, USA.
Hong LiDepartment of Craniofacial Biology, School of Dental Medicine, University of Colorado, Aurora, CO 80045, USA.
Eric C LiaoMassachusetts General Hospital, Plastic and Reconstructive Surgery, Boston, MA 02114, USA.
Hannah LongDepartments of Chemical and Systems Biology and of Developmental Biology, Howard Hughes Medical Institute, School of Medicine, Stanford University, Stanford, CA 94305, USA.
Na LuDepartment of Genetics and Genomic Sciences, Icahn School of Medicine at Mount Sinai, New York, NY 10029, USA.
Richard L MaasDivision of Genetics, Brigham and Women's Hospital, Harvard Medical School, Boston, MA 02115, USA.
Mary L MarazitaDepartment of Human Genetics, Graduate School of Public Health, University of Pittsburgh, Pittsburgh, PA 15219, USA.
Jaaved MohammedDepartments of Chemical and Systems Biology and of Developmental Biology, Howard Hughes Medical Institute, School of Medicine, Stanford University, Stanford, CA 94305, USA.
Sara PrescottDepartments of Chemical and Systems Biology and of Developmental Biology, Howard Hughes Medical Institute, School of Medicine, Stanford University, Stanford, CA 94305, USA.
Robert SchulerInformation Sciences Institute, Viterbi School of Engineering, University of Southern California, Marina del Rey, CA 90292, USA.
Licia SelleriProgram in Craniofacial Biology, Departments of Orofacial Sciences and of Anatomy, Institute of Human Genetics, University of California San Francisco, San Francisco, CA 94143, USA.
Richard A SpritzHuman Medical Genetics and Genomics Program, School of Medicine, University of Colorado, Aurora, CO 80045, USA.
Tomek SwigutDepartments of Chemical and Systems Biology and of Developmental Biology, Howard Hughes Medical Institute, School of Medicine, Stanford University, Stanford, CA 94305, USA.
Harm van BakelDepartment of Genetics and Genomic Sciences, Icahn School of Medicine at Mount Sinai, New York, NY 10029, USA.ORCID 0000-0002-1376-6916
Axel ViselLawrence Berkeley National Laboratory, Berkeley, CA 94720, USA.
Ian WelshProgram in Craniofacial Biology, Departments of Orofacial Sciences and of Anatomy, Institute of Human Genetics, University of California San Francisco, San Francisco, CA 94143, USA.
Cristina WilliamsInformation Sciences Institute, Viterbi School of Engineering, University of Southern California, Marina del Rey, CA 90292, USA.
Trevor J WilliamsDepartment of Craniofacial Biology, School of Dental Medicine, University of Colorado, Aurora, CO 80045, USA.
Joanna WysockaDepartments of Chemical and Systems Biology and of Developmental Biology, Howard Hughes Medical Institute, School of Medicine, Stanford University, Stanford, CA 94305, USA.
Yuan YuanCenter for Craniofacial Molecular Biology, Herman Ostrow School of Dentistry, University of Southern California, Los Angeles, CA 90033, USA.
Yang ChaiCenter for Craniofacial Molecular Biology, Herman Ostrow School of Dentistry, University of Southern California, Los Angeles, CA 90033, USA ychai@usc.edu.ORCID 0000-0003-2477-7247
University of Southern California · USHoward Hughes Medical Institute · USIcahn School of Medicine at Mount Sinai · USUniversity of California, San Francisco · USUniversity of Colorado Anschutz Medical Campus · USUniversity of Pittsburgh · USBoston Children's Hospital · USBoston University · USBrigham and Women's Hospital · USEmory University · USLawrence Berkeley National Laboratory · USMassachusetts General Hospital · USUniversity of Calgary · CAUniversity of Washington · US
Funding
Generation of an In Vivo Human Genome Transcriptional Enhancer DatasetR01HG003988 · NHGRI · UNIVERSITY OF CALIF-LAWRENC BERKELEY LAB · PI Len Alexander Pennacchio · 2006 to 2026
$24.1MUSC FaceBase III Craniofacial Development and Dysmorpholoy Data Management and Integration HubU01DE028729 · NIDCR · UNIVERSITY OF SOUTHERN CALIFORNIA · PI CHAI, YANG, KESSELMAN, CARL · 2019 to 2023
$13.9MFaceBase 2 Coordinating CenterU01DE024449 · NIDCR · UNIVERSITY OF SOUTHERN CALIFORNIA · PI KESSELMAN, CARL · 2014 to 2018
$10.2MPREDOCTORAL TRAINING IN DEVELOPMENTAL BIOLOGYT32HD007470 · NICHD · UNIVERSITY OF CALIFORNIA, SAN FRANCISCO · PI Todd Nystul · 1994 to 2026
$7.7MTranscriptome Atlases of the Craniofacial SuturesU01DE024448 · NIDCR · ICAHN SCHOOL OF MEDICINE AT MOUNT SINAI · PI HOLMES, GREG PETER, JABS, ETHYLIN WANG · 2014 to 2018
$3.7MGenomic, Transgenic and Knockout Resources for Craniofacial Enhancer StudiesU01DE024427 · NIDCR · UNIVERSITY OF CALIF-LAWRENC BERKELEY LAB · PI VISEL, AXEL · 2014 to 2018
$3.7MAnatomical atlas and transgenic toolkit for late skull formation in zebrafishU01DE024434 · NIDCR · UNIVERSITY OF PENNSYLVANIA · PI FISHER, SHANNON, HARRIS, MATTHEW P · 2014 to 2018
$3.3MDeveloping 3D Craniofacial Morphometry Data and Tools to Transform DysmorphologyU01DE024440 · NIDCR · UNIVERSITY OF COLORADO DENVER · PI HALLGRIMSSON, BENEDIKT, KLEIN, OPHIR D · 2014 to 2018
$3.3MEpigenetic landscapes and regulatory divergence of human craniofacial traitsU01DE024430 · NIDCR · STANFORD UNIVERSITY · PI SELLERI, LICIA, WYSOCKA, JOANNA · 2014 to 2018
$3.1MRapid Identification and Validation of Human Craniofacial Development GenesU01DE024443 · NIDCR · BRIGHAM AND WOMEN'S HOSPITAL · PI MAAS, RICHARD L · 2014 to 2018
$2.9MThe Ontology of Craniofacial Development and MalformationU01DE024417 · NIDCR · UNIVERSITY OF WASHINGTON · PI BRINKLEY, JAMES F · 2014 to 2018
$2.0MRNA dynamics in the developing mouse faceU01DE024429 · NIDCR · UNIVERSITY OF COLORADO DENVER · PI HOOPER, JOAN E, JONES, KENNETH LLOYD · 2014 to 2018
$1.7MNHGRI NIH HHS R01 HG003988NICHD NIH HHS T32 HD007470NIDCR NIH HHS U01 DE024417NIDCR NIH HHS U01 DE024421NIDCR NIH HHS U01 DE024425NIDCR NIH HHS U01 DE024427NIDCR NIH HHS U01 DE024429NIDCR NIH HHS U01 DE024430NIDCR NIH HHS U01 DE024434NIDCR NIH HHS U01 DE024440NIDCR NIH HHS U01 DE024443NIDCR NIH HHS U01 DE024448NIDCR NIH HHS U01 DE024449NIDCR NIH HHS U01 DE028729
Abstract
The FaceBase Consortium was established by the National Institute of Dental and Craniofacial Research in 2009 as a 'big data' resource for the craniofacial research community. Over the past decade, researchers have deposited hundreds of annotated and curated datasets on both normal and disordered craniofacial development in FaceBase, all freely available to the research community on the FaceBase Hub website. The Hub has developed numerous visualization and analysis tools designed to promote integration of multidisciplinary data while remaining dedicated to the FAIR principles of data management (findability, accessibility, interoperability and reusability) and providing a faceted search infrastructure for locating desired data efficiently. Summaries of the datasets generated by the FaceBase projects from 2014 to 2019 are provided here. FaceBase 3 now welcomes contributions of data on craniofacial and dental development in humans, model organisms and cell lines. Collectively, the FaceBase Consortium, along with other NIH-supported data resources, provide a continuously growing, dynamic and current resource for the scientific community while improving data reproducibility and fulfilling data sharing requirements.
Indexed as
AnimalsDatabases, FactualDental ResearchFacial BonesHumansReproducibility of ResultsResearch PersonnelSkullCraniofacial developmentData resourceFaceBase ConsortiumHumanMouseZebrafish
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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.