Evidence map›Paper›PMID 32956922›Full record

ReviewComparative biochemistry and physiology. Part D, Genomics & proteomics2020

Ecotoxico-lipidomics: An emerging concept to understand chemical-metabolic relationships in comparative fish models.

David A Dreier, John A Bowden, Juan J Aristizabal-Henao, Nancy D Denslow, Christopher J Martyniuk

Open access · greenAbstract readReview
In one paragraph

Review in Comparative biochemistry and physiology. Part D, Genomics & proteomics, 2020. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 8 papers.

0numbers the graph read from it
0cells of the map it votes in
8citing papers in PubMed
4.6field-weighted citation impact, top 5% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

8 citing papers in PubMed, 36 citations in OpenAlex.

  1. Article
  2. Article
  3. Article
  4. Article
  5. Review
  6. Article
  7. Article
  8. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

5 authors at 1 institution in 1 country.

David A DreierCenter for Environmental & Human Toxicology, Department of Physiological Sciences, College of Veterinary Medicine, Genetics Institute, University of Florida, Gainesville, FL, USA.
John A BowdenCenter for Environmental & Human Toxicology, Department of Physiological Sciences, College of Veterinary Medicine, Genetics Institute, University of Florida, Gainesville, FL, USA.
Juan J Aristizabal-HenaoCenter for Environmental & Human Toxicology, Department of Physiological Sciences, College of Veterinary Medicine, Genetics Institute, University of Florida, Gainesville, FL, USA.
Nancy D DenslowCenter for Environmental & Human Toxicology, Department of Physiological Sciences, College of Veterinary Medicine, Genetics Institute, University of Florida, Gainesville, FL, USA.
Christopher J MartyniukCenter for Environmental & Human Toxicology, Department of Physiological Sciences, College of Veterinary Medicine, Genetics Institute, University of Florida, Gainesville, FL, USA. Electronic address: cmartyn@ufl.edu.
University of Florida · US

Funding

Molecular Mechanisms of Endocrine Disruption in BassR01ES015449 · NIEHS · UNIVERSITY OF FLORIDA · PI DENSLOW, NANCY D · 2006 to 2011
$1.4M
Applied Biosystems SCIEX Q-TRAP 6500 LC/MS/MS Mass SpectrometerS10OD018141 · OD · UNIVERSITY OF FLORIDA · PI DENSLOW, NANCY D · 2015 to 2015
$584k
Organochlorine pesticide effects on neurotransmitter signalingK99ES016767 · NIEHS · UNIVERSITY OF FLORIDA · PI MARTYNIUK, CHRISTOPHER JOSEPH · 2009 to 2009
$47k
NIEHS NIH HHS K99 ES016767NIEHS NIH HHS R01 ES015449NIH HHS S10 OD018141
6 · The paper itself

Abstract

Lipids play an essential role in development, homeostatic functions, immune signaling, reproduction, and growth. Although it is evident that changes in lipid biosynthesis and metabolism can affect organismal physiology, few studies have determined how environmental stressors affect lipid pathways, let alone alter global lipid profiles in fish. This is a significant research gap, as a number of environmental contaminants interact with lipid signaling and metabolic pathways. In this review, we highlight the utility of lipidomics as a tool in environmental toxicology, discussing the current state of knowledge regarding chemical-lipidomic perturbations. As with most oviparous animals, the processing and storage of lipids during oocyte development is also particularly important for embryogenesis in fish. Using largemouth bass (Micropterus salmoides) as an example, transcriptomics data suggest that various chemicals alter lipid metabolism and regulation, highlighting the need for more sophisticated investigations into how toxicants impact lipid responses. We also point out the challenges ahead; these include a lack of understanding about lipid processing and signaling in fish, tissue and species-specific lipid composition, and extraneous factors (e.g., nutrition, temperature) that confound interpretation. For example, toxicant exposure can lead to oxidative stress and lipid peroxidation, resulting in complex lipid byproducts that are challenging to measure. With the emergence of lipidomics in systems toxicology, multi-omics approaches are expected to more clearly define effects on physiology, creating stronger linkages between multiple molecular entities (gene-protein-lipid/metabolite). The development and implementation of novel technologies such as ion mobility-mass spectrometry and ozone-induced dissociation support the complete structural elucidation of lipid molecules. This has implications in the adverse outcome pathway framework, which will enhance the application of lipidomics in toxicology by linking these molecular changes to effects at higher levels of biological organization.

Indexed as

Oxidative StressAnimalsEnvironmental PollutantsFishesLipid MetabolismLipidomicsLipidsEnvironmental PollutantsLipidsAdverse outcome pathwaysFishLipidomicsMass spectrometryReproductionVitellogenesis

Identifiers

PMID32956922
PMCPMC7669741
OpenAlexW3086729955

What OpenQuestion holds

Textmetadata
LicenceTDM
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.