Evidence map›Paper›PMID 32956370›Full record

ArticlePLoS genetics2020

Coordinate genomic association of transcription factors controlled by an imported quorum sensing peptide in Cryptococcus neoformans.

Diana K Summers, Daniela S Perry, Beiduo Rao, Hiten D Madhani

Open access · goldAbstract read
In one paragraph

Article in PLoS genetics, 2020. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 8 papers.

0numbers the graph read from it
0cells of the map it votes in
8citing papers in PubMed
1.2field-weighted citation impact, top 20% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

8 citing papers in PubMed, 16 citations in OpenAlex.

  1. Review
  2. Peroxisomes regulate virulence and cell density sensing inbioRxiv : the preprint server for biology · 2025
    Article
  3. Is Cryptococcus neoformans a pleomorphic fungus?Current opinion in microbiology · 2024
    Review
  4. Article
  5. Article
  6. CryptoCEN: A Co-Expression Network forbioRxiv : the preprint server for biology · 2023
    Article
  7. Article
  8. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

4 authors at 1 institution in 1 country.

Diana K SummersDepartment of Biochemistry and Biophysics, University of California, San Francisco, CA, United States of America.ORCID 0000-0002-1114-5446
Daniela S PerryDepartment of Biochemistry and Biophysics, University of California, San Francisco, CA, United States of America.ORCID 0000-0001-6870-1194
Beiduo RaoDepartment of Biochemistry and Biophysics, University of California, San Francisco, CA, United States of America.
Hiten D MadhaniDepartment of Biochemistry and Biophysics, University of California, San Francisco, CA, United States of America.ORCID 0000-0001-7400-6657
University of California, San Francisco · US

Funding

GENETICS OF EUCARYOTIC AND PROCARYOTIC ORGANISMST32GM007810 · NIGMS · UNIVERSITY OF CALIFORNIA, SAN FRANCISCO · PI ASHRAFI, KAVEH, NARLIKAR, GEETA J · 1985 to 2020
$15.1M
Rapid production of SARS-CoV-2 molecular clones using CRISPR-based yeast recombineeringR01AI100272 · NIAID · UNIVERSITY OF CALIFORNIA, SAN FRANCISCO · PI MADHANI, HITEN D · 2012 to 2025
$11.3M
Epigenetic control of virulence in a fungal meningitis pathogenR01AI120464 · NIAID · UNIVERSITY OF CALIFORNIA, SAN FRANCISCO · PI MADHANI, HITEN D · 2015 to 2019
$1.9M
Peptide-based signaling and virulence in Cryptococcus neoformansR56AI126726 · NIAID · UNIVERSITY OF CALIFORNIA, SAN FRANCISCO · PI MADHANI, HITEN D · 2017 to 2017
$377k
NIAID NIH HHS R01 AI100272NIAID NIH HHS R01 AI120464NIAID NIH HHS R56 AI126726NIGMS NIH HHS T32 GM007810
6 · The paper itself

Abstract

Qsp1 is a secreted quorum sensing peptide required for virulence of the fungal meningitis pathogen Cryptococcus neoformans. Qsp1 functions to control cell wall integrity in vegetatively growing cells and also functions in mating. Rather than acting on a cell surface receptor, Qsp1 is imported to act intracellularly via the predicted oligopeptide transporter Opt1. Here, we identify a transcription factor network as a target of Qsp1. Using whole-genome chromatin immunoprecipitation, we find Qsp1 controls the genomic associations of three transcription factors to genes whose outputs are regulated by Qsp1. One of these transcription factors, Cqs2, is also required for the action of Qsp1 during mating, indicating that it might be a shared proximal target of Qsp1. Consistent with this hypothesis, deletion of CQS2 impacts the binding of other network transcription factors specifically to Qsp1-regulated genes. These genetic and genomic studies illuminate mechanisms by which an imported peptide acts to modulate eukaryotic gene expression.

Indexed as

Cell CycleCell WallCryptococcosisCryptococcus neoformansFungal ProteinsGene Expression Regulation, FungalGenomicsMeningitis, FungalPeptidesQuorum SensingTranscription FactorsVirulenceVirulence FactorsFungal ProteinsPeptidesTranscription FactorsVirulence Factors

Identifiers

PMID32956370
PMCPMC7537855
OpenAlexW3087206110

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.