Evidence map›Paper›PMID 32951134›Full record

ArticleArchives of virology2020

A novel negevirus isolated from Aedes vexans mosquitoes in Finland.

Maija T Suvanto, Phuoc Truong Nguyen, Ruut Uusitalo, Essi M Korhonen, Giulia Faolotto, Olli Vapalahti, Eili Huhtamo, Teemu Smura

Open access · hybridAbstract read
In one paragraph

Article in Archives of virology, 2020. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 6 papers.

0numbers the graph read from it
0cells of the map it votes in
6citing papers in PubMed
1.4field-weighted citation impact, top 16% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

6 citing papers in PubMed, 10 citations in OpenAlex.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

8 authors at 1 institution in 1 country.

Maija T SuvantoDepartment of Virology, Medicum, University of Helsinki, Helsinki, Finland. maija.t.suvanto@helsinki.fi.ORCID http://orcid.org/0000-0003-4883-5755
Phuoc Truong NguyenDepartment of Virology, Medicum, University of Helsinki, Helsinki, Finland.ORCID http://orcid.org/0000-0002-4830-4113
Ruut UusitaloDepartment of Virology, Medicum, University of Helsinki, Helsinki, Finland.ORCID http://orcid.org/0000-0003-4170-8809
Essi M KorhonenDepartment of Virology, Medicum, University of Helsinki, Helsinki, Finland.ORCID http://orcid.org/0000-0003-4730-7715
Giulia FaolottoLaboratory of Microbiology and Virology, University Hospital Maggiore Della Carità Di Novara, Piemonte, Novara, Italy.ORCID http://orcid.org/0000-0003-4558-3230
Olli VapalahtiDepartment of Virology, Medicum, University of Helsinki, Helsinki, Finland.
Eili HuhtamoDepartment of Virology, Medicum, University of Helsinki, Helsinki, Finland.ORCID http://orcid.org/0000-0001-9640-6547
Teemu SmuraDepartment of Virology, Medicum, University of Helsinki, Helsinki, Finland.ORCID http://orcid.org/0000-0002-9187-3151
University of Helsinki · FI

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Negeviruses are insect-specific enveloped RNA viruses that have been detected in mosquitoes and sandflies from various geographical locations. Here, we describe a new negevirus from Northern Europe, isolated from pool of Aedes vexans mosquitoes collected in Finland, designated as Mekrijärvi negevirus (MEJNV). MEJNV had a typical negevirus genome organization, is 9,740 nucleotides in length, and has a GC content of 47.53%. The MEJNV genome contains three ORFs, each containing the following identified conserved domains: ORF1 (7,068 nt) encodes a viral methyltransferase, an FtsJ-like methyltransferase, a viral RNA helicase, and an RNA-dependent RNA polymerase, ORF2 (1,242 nt) encodes a putative virion glycoprotein, and ORF3 (660 nt) encodes a putative virion membrane protein. A distinctive feature relative to other currently known negeviruses is a 7-nucleotide-long overlap between ORF1 and ORF2. MEJNV shares the highest sequence identity with Ying Kou virus from China, with 67.71% nucleotide and 75.19% and 59.00% amino acid sequence identity in ORF 1 and ORF 2, respectively. ORF3 had the highest amino acid sequence similarity to Daeseongdong virus 1 and negevirus Nona 1, both with 77.61% identity, and to Ying Kou virus, with 71.22% identity. MEJNV is currently the northernmost negevirus described. Our report supports the view that negeviruses are a globally distributed, diverse group of viruses that can be found from mosquitoes in a wide range of terrestrial biomes from tropical to boreal forests.

Indexed as

AedesAmino Acid SequenceAnimal DistributionAnimalsCell LineFinlandGenome, ViralInsect VirusesOpen Reading FramesPhylogenyRNA-Dependent RNA PolymeraseRNA, ViralRNA VirusesViral ProteinsRNA-Dependent RNA PolymeraseRNA, ViralViral Proteins

Identifiers

PMID32951134
PMCPMC7588393
OpenAlexW3087268495

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.