Evidence map›Paper›PMID 32950604›Full record

ArticleJournal of structural biology2020

Light-coupled cryo-plunger for time-resolved cryo-EM.

Nate Yoder, Farzad Jalali-Yazdi, Sigrid Noreng, Alexandra Houser, Isabelle Baconguis, Eric Gouaux

Abstract read
In one paragraph

Article in Journal of structural biology, 2020. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 24 papers.

0numbers the graph read from it
0cells of the map it votes in
24citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

24 citing papers in PubMed.

  1. Article
  2. Article
  3. Article
  4. Microsecond Time-Resolved Cryo-EM Based on Jet Vitrification.bioRxiv : the preprint server for biology · 2025
    Article
  5. Article
  6. Article
  7. State-of-the-Art and Future Directions in Structural Proteomics.Molecular & cellular proteomics : MCP · 2025
    Review
  8. Review
  9. Article
  10. Article
  11. Article
  12. Article
  13. Article
  14. Article
  15. Review
  16. Article
  17. Review
  18. Recent advances and current trends in cryo-electron microscopy.Current opinion in structural biology · 2022
    Review
  19. Article
  20. Structural dynamics: review of time-resolved cryo-EM.Acta crystallographica. Section D, Structural biology · 2022
    Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

6 authors.

Nate YoderVollum Institute, Oregon Health & Science University, Portland, OR 97239, USA.
Farzad Jalali-YazdiVollum Institute, Oregon Health & Science University, Portland, OR 97239, USA.
Sigrid NorengVollum Institute, Oregon Health & Science University, Portland, OR 97239, USA.
Alexandra HouserVollum Institute, Oregon Health & Science University, Portland, OR 97239, USA.
Isabelle BaconguisVollum Institute, Oregon Health & Science University, Portland, OR 97239, USA.
Eric GouauxVollum Institute, Oregon Health & Science University, Portland, OR 97239, USA; Howard Hughes Medical Institute, Oregon Health & Science University, Portland, OR 97239, USA. Electronic address: gouauxe@ohsu.edu.

Funding

Pacific Northwest Center for Cryo-EM - Screening supplementU24GM129547 · NIGMS · OREGON HEALTH & SCIENCE UNIVERSITY · PI EVANS, JAMES E, GOUAUX, JAMES E · 2018 to 2023
$54.8M
NCCAT: National Center for CryoEM Access and Training- Supplement for Windows 10 and FFIU24GM129539 · NIGMS · NEW YORK STRUCTURAL BIOLOGY CENTER · PI DE MARCO, ALEX, KIEFT, JEFFREY S · 2018 to 2023
$53.9M
MULTIDISCIPLINARY TRAINING IN NEUROENDOCRINOLOGYT32DK007680 · NIDDK · OREGON HEALTH & SCIENCE UNIVERSITY · PI GOODMAN, RICHARD H. · 1991 to 2015
$6.8M
3D STRUCTURE/FUNCTION OF LIGAND GATED ION CHANNELSR01NS038631 · NINDS · OREGON HEALTH & SCIENCE UNIVERSITY · PI GOUAUX, JAMES E · 1999 to 2024
$6.7M
Structure and Function of Epithelial Sodium ChannelsDP5OD017871 · OD · OREGON HEALTH & SCIENCE UNIVERSITY · PI BACONGUIS, ISABELLE RHYSSA JOE EDURIA · 2013 to 2017
$1.9M
Elucidating the Structural Mechanism of NMDA Receptor Modulation by Cryo-Electron MicroscopyF32MH115595 · NIMH · OREGON HEALTH & SCIENCE UNIVERSITY · PI JALALI-YAZDI, FARZAD · 2017 to 2020
$192k
Structure of an acid sensing ion channel in a resting state at high pH.F31NS096782 · NINDS · OREGON HEALTH & SCIENCE UNIVERSITY · PI YODER, NATHAN · 2016 to 2018
$132k
Howard Hughes Medical InstituteNIDDK NIH HHS T32 DK007680NIGMS NIH HHS U24 GM129539NIGMS NIH HHS U24 GM129547NIH HHS DP5 OD017871NIMH NIH HHS F32 MH115595NINDS NIH HHS F31 NS096782NINDS NIH HHS R01 NS038631
6 · The paper itself

Abstract

Proteins are dynamic molecules that can undergo rapid conformational rearrangements in response to stimuli. These structural changes are often critical to protein function, and thus elucidating time-dependent conformational landscapes has been a long-standing goal of structural biology. To harness the power of single particle cryo-EM methods to enable 'time-resolved' structure determination, we have developed a light-coupled cryo-plunger that pairs flash-photolysis of caged ligands with rapid sample vitrification. The 'flash-plunger' consists of a high-power ultraviolet LED coupled with focusing optics and a motorized linear actuator, enabling the user to immobilize protein targets in vitreous ice within a programmable time window - as short as tens of milliseconds - after stimulus delivery. The flash-plunger is a simple, inexpensive and flexible tool to explore short-lived conformational states previously unobtainable by conventional sample preparation methods.

Indexed as

Cryoelectron MicroscopyLigandsLightMolecular ConformationProteinsSpecimen HandlingVitrificationLigandsProteinsCryo-electron microscopyCryo-EMManual cryo-plungerSingle particleTime-resolved

Identifiers

PMID32950604
PMCPMC7959588

What OpenQuestion holds

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Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.