ArticleG3 (Bethesda, Md.)2020
A Reference Genome Sequence for Giant Sequoia.
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Article in G3 (Bethesda, Md.), 2020. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 52 papers.
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52citing papers in PubMed
19.5field-weighted citation impact, top 1% of its field
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Who cites it
52 citing papers in PubMed, 123 citations in OpenAlex.
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- A chromosome-level genome assembly of a model conifer plant, the Japanese cedar, Cryptomeria japonica D. Don.BMC genomics · 2024Article
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- Conifers Concentrate Large Numbers of NLR Immune Receptor Genes on One Chromosome.Genome biology and evolution · 2024Article
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- Transcriptome profiles reveal response mechanisms and key role of PsNAC1 in Pinus sylvestris var. mongolica to drought stress.BMC plant biology · 2024Article
- High-density genetic linkage mapping in Sitka spruce advances the integration of genomic resources in conifers.G3 (Bethesda, Md.) · 2024Article
- Assembly and annotation of the black spruce genome provide insights on spruce phylogeny and evolution of stress response.G3 (Bethesda, Md.) · 2023Article
- Identification and high-throughput genotyping of single nucleotide polymorphism markers in a non-model conifer (Abies nordmanniana (Steven) Spach).Scientific reports · 2023Article
- The Development of Plant Genome Sequencing Technology and Its Conservation and Application in Endangered Gymnosperms.Plants (Basel, Switzerland) · 2023Review
- Contrasting new and available reference genomes to highlight uncertainties in assemblies and areas for future improvement: an example with monodontid species.BMC genomics · 2023Article
- The Metasequoia genome and evolutionary relationships among redwoods.Plant communications · 2023Article
Corrections and comments
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Authors and funding
14 authors at 6 institutions in 1 country.
Alison D ScottDepartment of Plant Sciences, University of California, Davis, CA 95616 aliscott@ucdavis.edu.ORCID 0000-0002-4508-2973
Aleksey V ZiminCenter for Computational Biology, Whiting School of Engineering, Johns Hopkins University, Baltimore, MD 21211.
Daniela PuiuCenter for Computational Biology, Whiting School of Engineering, Johns Hopkins University, Baltimore, MD 21211.ORCID 0000-0002-2386-9265
Rachael WorkmanDepartment of Biomedical Engineering, Johns Hopkins University, Baltimore, MD 21218.ORCID 0000-0002-4119-2948
Monica BrittonBioinformatics Core, University of California, Davis, CA 95616.
Sumaira ZamanDepartment of Computer Science and Engineering, University of Connecticut, Storrs, CT 06269.
Madison CaballeroDepartment of Molecular Biology and Genetics, Cornell University, Ithaca, NY 14850.
Andrew C ReadPlant Pathology and Plant-Microbe Biology Section, School of Integrative Plant Science, Cornell University, Ithaca, NY 14853.
Adam J BogdanovePlant Pathology and Plant-Microbe Biology Section, School of Integrative Plant Science, Cornell University, Ithaca, NY 14853.ORCID 0000-0003-1683-4117
Emily BurnsSave the Redwoods League, San Francisco, CA 94104.
Jill WegrzynDepartment of Ecology and Evolutionary Biology, University of Connecticut, Storrs, CT 06269.ORCID 0000-0001-5923-0888
Winston TimpDepartment of Biomedical Engineering, Johns Hopkins University, Baltimore, MD 21218.ORCID 0000-0003-2083-6027
Steven L SalzbergCenter for Computational Biology, Whiting School of Engineering, Johns Hopkins University, Baltimore, MD 21211.ORCID 0000-0002-8859-7432
David B NealeDepartment of Plant Sciences, University of California, Davis, CA 95616.
Johns Hopkins University · USCornell University · USUniversity of California, Davis · USUniversity of Connecticut · USSave the Redwoods League · USUniversity of Maryland, College Park · US
Funding
Computational Methods for Genome Assembly, Transcript Assembly, and Variant DiscoveryR01HG006677 · NHGRI · JOHNS HOPKINS UNIVERSITY · PI SALZBERG, STEVEN L. · 2011 to 2025
$10.7MAcquisition of Covaris E220 and Sciclone G3 systems for high throughput sequencinS10OD010786 · OD · UNIVERSITY OF CALIFORNIA AT DAVIS · PI COMAI, LUCA · 2012 to 2012
$311kNHGRI NIH HHS R01 HG006677NIH HHS S10 OD010786
Abstract
The giant sequoia (
Indexed as
SequoiadendronChromosomesGenomeHigh-Throughput Nucleotide SequencingMolecular Sequence AnnotationTreesconiferdisease resistance genesgenome assemblygiant sequoiagymnospermSequoiadendron giganteum
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