Evidence map›Paper›PMID 32948222›Full record

ArticleBMC research notes2020

Dynamics of the transcriptome during chicken embryo development based on primordial germ cells.

Aleksandra Dunislawska, Agata Szczerba, Maria Siwek, Marek Bednarczyk

Open access · goldAbstract read
In one paragraph

Article in BMC research notes, 2020. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 5 papers.

0numbers the graph read from it
0cells of the map it votes in
5citing papers in PubMed
0.7field-weighted citation impact, top 25% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

5 citing papers in PubMed, 7 citations in OpenAlex.

  1. Article
  2. Article
  3. Germline stem cells in human.Signal transduction and targeted therapy · 2022
    Review
  4. Article
  5. Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

4 authors at 1 institution in 1 country.

Aleksandra DunislawskaDepartment of Animal Biotechnology and Genetics, UTP University of Science and Technology, Bydgoszcz, Poland.
Agata SzczerbaDepartment of Animal Biotechnology and Genetics, UTP University of Science and Technology, Bydgoszcz, Poland.
Maria SiwekDepartment of Animal Biotechnology and Genetics, UTP University of Science and Technology, Bydgoszcz, Poland.
Marek BednarczykDepartment of Animal Biotechnology and Genetics, UTP University of Science and Technology, Bydgoszcz, Poland. marbed13@op.pl.ORCID http://orcid.org/0000-0003-4515-193X
Bydgoszcz University of Science and Technology · PL

Funding

Narodowe Centrum Nauki UMO-2017/27/B/NZ9/01510
6 · The paper itself

Abstract

objectiveRegulation of gene expression during embryo development on the basis of migration of primordial germ cells (PGCs) in vivo has been rarely studied due to limited cell number and the necessity to isolate PGCs from a large number of embryos. Moreover, little is known about the comprehensive dynamics of the transcriptome in chicken PGCs during early developmental stages. The current study investigated transcriptome dynamics of chicken PGCs at key developmental stages: 4.5, 8 and 12 days of embryo incubation. PGCs were collected, and RNA was isolated using a commercial kit for single cells. The isolated RNA was subjected to microarray analysis (Agilent Technologies).

resultsBetween 8 and 12 days of incubation, the highest number of genes was regulated. These data indicate that the most intense biological activity occurs between 8 and 12 days of embryo development. Heat map showed a significant decrease in gene expression on day 8, while it increased on day 12. The development of a precise method to isolate bird PGCs as well as the method to isolate RNA from single cells isolated from one embryo allows for early molecular analysis and detection of transcriptome changes during embryonic development.

Indexed as

ChickensTranscriptomeAnimalsChick EmbryoEmbryonic DevelopmentGerm CellsGene expressionMicroarrayPrimordial germ cellsWhite Leghorn

Identifiers

PMID32948222
PMCPMC7501632
OpenAlexW3087283730

What OpenQuestion holds

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LicenceCC BY
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Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.