Evidence map›Paper›PMID 32946440›Full record

ArticlePloS one2020

Functional gene categories differentiate maize leaf drought-related microbial epiphytic communities.

Barbara A Methe, David Hiltbrand, Jeffrey Roach, Wenwei Xu, Stuart G Gordon, Brad W Goodner, Ann E Stapleton

Abstract read
In one paragraph

Article in PloS one, 2020. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 4 papers.

0numbers the graph read from it
0cells of the map it votes in
4citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

4 citing papers in PubMed.

  1. Applied microbiology of the phyllosphere.Applied microbiology and biotechnology · 2024
    Review
  2. Article
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

7 authors.

Barbara A MetheJ Craig Venter Institute, Medical Center Drive, Rockville, MD, United States of America.
David HiltbrandDepartment of Biology and Marine Biology, University of North Carolina Wilmington, Wilmington, NC, United States of America.
Jeffrey RoachResearch Computing, University of North Carolina Chapel Hill, Chapel Hill, NC, United States of America.
Wenwei XuAgricultural and Extension Center, Texas A and M AgriLife Research, Lubbock, TX, United States of America.
Stuart G GordonBiology Department, Presbyterian College, Clinton, SC, United States of America.
Brad W GoodnerDepartment, Hiram College, Hiram, OH, United States of America.
Ann E StapletonDepartment of Biology and Marine Biology, University of North Carolina Wilmington, Wilmington, NC, United States of America.ORCID 0000-0001-7242-2673

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

The phyllosphere epiphytic microbiome is composed of microorganisms that colonize the external aerial portions of plants. Relationships of plant responses to specific microorganisms-both pathogenic and beneficial-have been examined, but the phyllosphere microbiome functional and metabolic profile responses are not well described. Changing crop growth conditions, such as increased drought, can have profound impacts on crop productivity. Also, epiphytic microbial communities provide a new target for crop yield optimization. We compared Zea mays leaf microbiomes collected under drought and well-watered conditions by examining functional gene annotation patterns across three physically disparate locations each with and without drought treatment, through the application of short read metagenomic sequencing. Drought samples exhibited different functional sequence compositions at each of the three field sites. Maize phyllosphere functional profiles revealed a wide variety of metabolic and regulatory processes that differed in drought and normal water conditions and provide key baseline information for future selective breeding.

Indexed as

DroughtsGene Regulatory NetworksGenes, PlantMetagenomicsMicrobiotaMolecular Sequence AnnotationPlant LeavesStress, PhysiologicalWaterZea maysWater

Identifiers

PMID32946440
PMCPMC7500591

What OpenQuestion holds

Textmetadata
LicenceCC0
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.