Evidence map›Paper›PMID 32946121›Full record

ArticleThe EMBO journal2020

RAB13 mRNA compartmentalisation spatially orients tissue morphogenesis.

Guilherme Costa, Joshua J Bradbury, Nawseen Tarannum, Shane P Herbert

Open access · hybridAbstract read
In one paragraph

Article in The EMBO journal, 2020. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 24 papers.

0numbers the graph read from it
0cells of the map it votes in
24citing papers in PubMed
1.8field-weighted citation impact, top 14% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

24 citing papers in PubMed, 38 citations in OpenAlex.

  1. Article
  2. Article
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  4. Reprogramming mRNA localization by targeted RNA-protein interference.bioRxiv : the preprint server for biology · 2026
    Article
  5. Article
  6. Article
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  8. Article
  9. Review
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  11. Review
  12. The scaffolding protein AKAP12 regulates mRNA localization and translation.Proceedings of the National Academy of Sciences of the United States of America · 2024
    Article
  13. Article
  14. Article
  15. Localization ofGenes & development · 2023
    Article
  16. It's complicated: the interplay ofGenes & development · 2023
    Article
  17. Article
  18. Regulation and outcomes of localized RNA translation.Wiley interdisciplinary reviews. RNA · 2022
    Review
  19. Article
  20. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

4 authors at 2 institutions in 1 country.

Guilherme CostaFaculty of Biology, Medicine and Health, University of Manchester, Manchester, UK.ORCID 0000-0003-2313-3319
Joshua J BradburyFaculty of Biology, Medicine and Health, University of Manchester, Manchester, UK.
Nawseen TarannumFaculty of Biology, Medicine and Health, University of Manchester, Manchester, UK.
Shane P HerbertFaculty of Biology, Medicine and Health, University of Manchester, Manchester, UK.ORCID 0000-0003-2517-1845
Manchester Academic Health Science Centre · GBQueen's University Belfast · GB

Funding

British Heart Foundation (BHF) PG/16/2/31863Wellcome TrustWellcome Trust (WT) 095718/Z/11/ZWellcome Trust (WT) 204796/Z/16/ZWellcome Trust (WT) 219500/Z/19/Z
6 · The paper itself

Abstract

Polarised targeting of diverse mRNAs to cellular protrusions is a hallmark of cell migration. Although a widespread phenomenon, definitive functions for endogenous targeted mRNAs and their relevance to modulation of in vivo tissue dynamics remain elusive. Here, using single-molecule analysis, gene editing and zebrafish live-cell imaging, we report that mRNA polarisation acts as a molecular compass that orients motile cell polarity and spatially directs tissue movement. Clustering of protrusion-derived RNAseq datasets defined a core 192-nt localisation element underpinning precise mRNA targeting to sites of filopodia formation. Such targeting of the small GTPase RAB13 generated tight spatial coupling of mRNA localisation, translation and protein activity, achieving precise subcellular compartmentalisation of RAB13 protein function to create a polarised domain of filopodia extension. Consequently, genomic excision of this localisation element and perturbation of RAB13 mRNA targeting-but not translation-depolarised filopodia dynamics in motile endothelial cells and induced mispatterning of blood vessels in zebrafish. Hence, mRNA polarisation, not expression, is the primary determinant of the site of RAB13 action, preventing ectopic functionality at inappropriate subcellular loci and orienting tissue morphogenesis.

Indexed as

AnimalsCell MovementCell PolarityEndothelial CellsGene EditingGTP PhosphohydrolasesMorphogenesisPseudopodiarab GTP-Binding ProteinsRNA, MessengerZebrafishGTP Phosphohydrolasesrab GTP-Binding ProteinsRNA, Messengerangiogenesisendothelial cellfilopodiamRNA targetingzebrafish

Identifiers

PMID32946121
PMCPMC7604621
OpenAlexW3087098665

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.